Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRUB2O95900 KRT16P6-202ENST00000425692 1426 ntBASIC20.78■□□□□ 0.92
TRUB2O95900 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.78■□□□□ 0.92
TRUB2O95900 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRUB2O95900 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.78■□□□□ 0.92
TRUB2O95900 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRUB2O95900 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.78■□□□□ 0.92
TRUB2O95900 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.78■□□□□ 0.92
TRUB2O95900 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.78■□□□□ 0.92
TRUB2O95900 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
TRUB2O95900 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRUB2O95900 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
TRUB2O95900 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRUB2O95900 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRUB2O95900 POM121L13P-201ENST00000422362 380 ntBASIC20.77■□□□□ 0.92
TRUB2O95900 FAM201B-201ENST00000458407 597 ntBASIC20.77■□□□□ 0.92
TRUB2O95900 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.77■□□□□ 0.92
TRUB2O95900 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.77■□□□□ 0.92
TRUB2O95900 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.77■□□□□ 0.92
TRUB2O95900 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.77■□□□□ 0.92
TRUB2O95900 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.77■□□□□ 0.92
TRUB2O95900 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.77■□□□□ 0.92
TRUB2O95900 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRUB2O95900 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRUB2O95900 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
TRUB2O95900 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.77■□□□□ 0.91
TRUB2O95900 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TRUB2O95900 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRUB2O95900 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB2O95900 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
TRUB2O95900 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
TRUB2O95900 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRUB2O95900 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB2O95900 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB2O95900 ABHD17AP1-201ENST00000358206 933 ntBASIC20.76■□□□□ 0.91
TRUB2O95900 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.76■□□□□ 0.91
TRUB2O95900 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB2O95900 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.76■□□□□ 0.91
TRUB2O95900 RPS2P52-201ENST00000469610 820 ntBASIC20.76■□□□□ 0.91
TRUB2O95900 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB2O95900 AC124283.5-201ENST00000624661 1809 ntBASIC20.76■□□□□ 0.91
TRUB2O95900 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRUB2O95900 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.75■□□□□ 0.91
TRUB2O95900 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRUB2O95900 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.75■□□□□ 0.91
TRUB2O95900 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRUB2O95900 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRUB2O95900 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.75■□□□□ 0.91
TRUB2O95900 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.75■□□□□ 0.91
TRUB2O95900 AC006058.3-201ENST00000606217 1069 ntBASIC20.75■□□□□ 0.91
TRUB2O95900 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.75■□□□□ 0.91
TRUB2O95900 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRUB2O95900 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB2O95900 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.74■□□□□ 0.91
TRUB2O95900 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB2O95900 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 KRT17P3-201ENST00000420566 1262 ntBASIC20.74■□□□□ 0.91
TRUB2O95900 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB2O95900 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.74■□□□□ 0.91
TRUB2O95900 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB2O95900 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.74■□□□□ 0.91
TRUB2O95900 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB2O95900 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.74■□□□□ 0.91
TRUB2O95900 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.74■□□□□ 0.91
TRUB2O95900 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.74■□□□□ 0.91
TRUB2O95900 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.74■□□□□ 0.91
TRUB2O95900 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRUB2O95900 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB2O95900 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB2O95900 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.73■□□□□ 0.91
TRUB2O95900 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms