Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SIX6O95475 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SIX6O95475 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX6O95475 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX6O95475 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX6O95475 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX6O95475 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.55■□□□□ 0.24
SIX6O95475 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.55■□□□□ 0.24
SIX6O95475 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SIX6O95475 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SIX6O95475 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX6O95475 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX6O95475 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX6O95475 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.54■□□□□ 0.24
SIX6O95475 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX6O95475 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.54■□□□□ 0.24
SIX6O95475 SLC47A1P1-202ENST00000449666 945 ntBASIC16.54■□□□□ 0.24
SIX6O95475 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX6O95475 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX6O95475 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX6O95475 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SIX6O95475 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.53■□□□□ 0.24
SIX6O95475 AL033527.3-201ENST00000566366 1196 ntBASIC16.53■□□□□ 0.24
SIX6O95475 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.53■□□□□ 0.24
SIX6O95475 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SIX6O95475 AC009237.3-201ENST00000393279 1427 ntBASIC16.53■□□□□ 0.24
SIX6O95475 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SIX6O95475 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.53■□□□□ 0.24
SIX6O95475 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.53■□□□□ 0.24
SIX6O95475 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX6O95475 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX6O95475 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIX6O95475 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SIX6O95475 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX6O95475 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms