Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.88■□□□□ 0.77
VAPBO95292 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
VAPBO95292 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
VAPBO95292 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.88■□□□□ 0.77
VAPBO95292 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.88■□□□□ 0.77
VAPBO95292 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.88■□□□□ 0.77
VAPBO95292 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.88■□□□□ 0.77
VAPBO95292 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.88■□□□□ 0.77
VAPBO95292 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.88■□□□□ 0.77
VAPBO95292 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
VAPBO95292 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPBO95292 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.88■□□□□ 0.77
VAPBO95292 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 AC116562.4-201ENST00000641316 2276 ntBASIC19.87■□□□□ 0.77
VAPBO95292 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.87■□□□□ 0.77
VAPBO95292 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.87■□□□□ 0.77
VAPBO95292 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VAPBO95292 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.87■□□□□ 0.77
VAPBO95292 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.87■□□□□ 0.77
VAPBO95292 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.87■□□□□ 0.77
VAPBO95292 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.87■□□□□ 0.77
VAPBO95292 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 TREX1-205ENST00000625293 1783 ntBASIC19.87■□□□□ 0.77
VAPBO95292 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.87■□□□□ 0.77
VAPBO95292 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPBO95292 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPBO95292 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.86■□□□□ 0.77
VAPBO95292 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VAPBO95292 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 PHGDH-210ENST00000641115 1638 ntBASIC19.86■□□□□ 0.77
VAPBO95292 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 AP001271.2-201ENST00000624018 1556 ntBASIC19.86■□□□□ 0.77
VAPBO95292 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VAPBO95292 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.86■□□□□ 0.77
VAPBO95292 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.86■□□□□ 0.77
VAPBO95292 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.85■□□□□ 0.77
VAPBO95292 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
VAPBO95292 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
VAPBO95292 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VAPBO95292 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VAPBO95292 NCF1B-203ENST00000435988 1254 ntBASIC19.85■□□□□ 0.77
VAPBO95292 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.85■□□□□ 0.77
VAPBO95292 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms