Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
CDKL5O76039 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDKL5O76039 HLA-L-209ENST00000420110 1011 ntBASIC23.03■■□□□ 1.28
CDKL5O76039 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.03■■□□□ 1.28
CDKL5O76039 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.03■■□□□ 1.28
CDKL5O76039 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.03■■□□□ 1.28
CDKL5O76039 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.03■■□□□ 1.28
CDKL5O76039 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CDKL5O76039 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDKL5O76039 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.03■■□□□ 1.28
CDKL5O76039 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKL5O76039 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.02■■□□□ 1.28
CDKL5O76039 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CDKL5O76039 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CDKL5O76039 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.02■■□□□ 1.28
CDKL5O76039 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.02■■□□□ 1.28
CDKL5O76039 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.02■■□□□ 1.28
CDKL5O76039 PNMA6B-201ENST00000538162 1200 ntBASIC23.02■■□□□ 1.28
CDKL5O76039 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.02■■□□□ 1.28
CDKL5O76039 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CDKL5O76039 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.02■■□□□ 1.28
CDKL5O76039 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKL5O76039 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
CDKL5O76039 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
CDKL5O76039 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.01■■□□□ 1.27
CDKL5O76039 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.01■■□□□ 1.27
CDKL5O76039 AC116351.2-201ENST00000606540 1585 ntBASIC23.01■■□□□ 1.27
CDKL5O76039 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.01■■□□□ 1.27
CDKL5O76039 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CDKL5O76039 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CDKL5O76039 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.01■■□□□ 1.27
CDKL5O76039 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 AL355802.2-201ENST00000402069 882 ntBASIC23.01■■□□□ 1.27
CDKL5O76039 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CDKL5O76039 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.01■■□□□ 1.27
CDKL5O76039 AC006557.6-201ENST00000623071 864 ntBASIC23.01■■□□□ 1.27
CDKL5O76039 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.01■■□□□ 1.27
CDKL5O76039 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.01■■□□□ 1.27
CDKL5O76039 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDKL5O76039 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CDKL5O76039 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23■■□□□ 1.27
CDKL5O76039 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23■■□□□ 1.27
CDKL5O76039 AC018553.1-201ENST00000616682 1458 ntBASIC23■■□□□ 1.27
CDKL5O76039 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CDKL5O76039 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 ID1-201ENST00000376105 1233 ntBASIC23■■□□□ 1.27
CDKL5O76039 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CDKL5O76039 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23■■□□□ 1.27
CDKL5O76039 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
CDKL5O76039 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDKL5O76039 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
CDKL5O76039 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDKL5O76039 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDKL5O76039 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CDKL5O76039 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDKL5O76039 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.99■■□□□ 1.27
CDKL5O76039 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.99■■□□□ 1.27
CDKL5O76039 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.99■■□□□ 1.27
CDKL5O76039 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDKL5O76039 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.99■■□□□ 1.27
CDKL5O76039 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDKL5O76039 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.99■■□□□ 1.27
CDKL5O76039 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.99■■□□□ 1.27
CDKL5O76039 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms