Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.63■□□□□ 0.89
LRCH4O75427 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.63■□□□□ 0.89
LRCH4O75427 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.63■□□□□ 0.89
LRCH4O75427 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 AC006557.6-201ENST00000623071 864 ntBASIC20.63■□□□□ 0.89
LRCH4O75427 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH4O75427 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.63■□□□□ 0.89
LRCH4O75427 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.63■□□□□ 0.89
LRCH4O75427 AC116351.2-201ENST00000606540 1585 ntBASIC20.63■□□□□ 0.89
LRCH4O75427 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH4O75427 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH4O75427 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH4O75427 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRCH4O75427 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH4O75427 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH4O75427 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 AC133041.1-202ENST00000642053 222 ntBASIC20.62■□□□□ 0.89
LRCH4O75427 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LRCH4O75427 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 AC092368.3-202ENST00000574180 1591 ntBASIC20.62■□□□□ 0.89
LRCH4O75427 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH4O75427 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH4O75427 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.61■□□□□ 0.89
LRCH4O75427 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 HLA-L-209ENST00000420110 1011 ntBASIC20.61■□□□□ 0.89
LRCH4O75427 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.61■□□□□ 0.89
LRCH4O75427 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.61■□□□□ 0.89
LRCH4O75427 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.61■□□□□ 0.89
LRCH4O75427 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.61■□□□□ 0.89
LRCH4O75427 AC060766.5-201ENST00000590539 871 ntBASIC20.61■□□□□ 0.89
LRCH4O75427 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.61■□□□□ 0.89
LRCH4O75427 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
LRCH4O75427 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
LRCH4O75427 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 AC116562.4-201ENST00000641316 2276 ntBASIC20.61■□□□□ 0.89
LRCH4O75427 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
LRCH4O75427 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRCH4O75427 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
LRCH4O75427 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 AC124283.5-201ENST00000624661 1809 ntBASIC20.6■□□□□ 0.89
LRCH4O75427 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.6■□□□□ 0.89
LRCH4O75427 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.6■□□□□ 0.89
LRCH4O75427 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.6■□□□□ 0.89
LRCH4O75427 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.6■□□□□ 0.89
LRCH4O75427 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.6■□□□□ 0.89
LRCH4O75427 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 PNMA6B-201ENST00000538162 1200 ntBASIC20.6■□□□□ 0.89
LRCH4O75427 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRCH4O75427 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.6■□□□□ 0.89
LRCH4O75427 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH4O75427 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH4O75427 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
LRCH4O75427 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms