Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.93■□□□□ 0.3
SSX5O60225 AC007322.3-201ENST00000426526 701 ntBASIC16.93■□□□□ 0.3
SSX5O60225 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L2-201ENST00000561772 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX5O60225 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L6-201ENST00000626483 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L1-201ENST00000627662 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L8-201ENST00000629013 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L3-201ENST00000630187 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L7-201ENST00000630678 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 DUX4L5-201ENST00000630834 1275 ntBASIC16.93■□□□□ 0.3
SSX5O60225 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX5O60225 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX5O60225 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX5O60225 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SSX5O60225 Z82202.1-201ENST00000623446 1880 ntBASIC16.93■□□□□ 0.3
SSX5O60225 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SSX5O60225 LTB4R2-202ENST00000528054 3092 ntBASIC16.92■□□□□ 0.3
SSX5O60225 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.92■□□□□ 0.3
SSX5O60225 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSX5O60225 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SSX5O60225 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX5O60225 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX5O60225 AC104187.1-201ENST00000607510 612 ntBASIC16.92■□□□□ 0.3
SSX5O60225 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SSX5O60225 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SSX5O60225 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX5O60225 AC020763.4-201ENST00000623414 4170 ntBASIC16.92■□□□□ 0.3
SSX5O60225 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX5O60225 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 RBM17P2-201ENST00000616397 1405 ntBASIC16.91■□□□□ 0.3
SSX5O60225 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX5O60225 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.91■□□□□ 0.3
SSX5O60225 AP001160.3-201ENST00000601484 763 ntBASIC16.91■□□□□ 0.3
SSX5O60225 AC110285.6-201ENST00000617652 491 ntBASIC16.91■□□□□ 0.3
SSX5O60225 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.91■□□□□ 0.3
SSX5O60225 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX5O60225 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
SSX5O60225 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SSX5O60225 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX5O60225 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX5O60225 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX5O60225 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SSX5O60225 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.9■□□□□ 0.3
SSX5O60225 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.9■□□□□ 0.3
SSX5O60225 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX5O60225 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.9■□□□□ 0.3
SSX5O60225 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.9■□□□□ 0.3
SSX5O60225 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.9■□□□□ 0.3
SSX5O60225 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.9■□□□□ 0.3
SSX5O60225 FAM21FP-204ENST00000608637 956 ntBASIC16.9■□□□□ 0.3
SSX5O60225 AC243732.1-201ENST00000612648 864 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms