Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.3■■□□□ 1.64
ABCC4O15439 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.3■■□□□ 1.64
ABCC4O15439 BX088651.1-201ENST00000540551 451 ntBASIC25.3■■□□□ 1.64
ABCC4O15439 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ABCC4O15439 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ABCC4O15439 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
ABCC4O15439 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.3■■□□□ 1.64
ABCC4O15439 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ABCC4O15439 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ABCC4O15439 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.29■■□□□ 1.64
ABCC4O15439 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
ABCC4O15439 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
ABCC4O15439 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
ABCC4O15439 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 KRASP1-201ENST00000407852 552 ntBASIC25.29■■□□□ 1.64
ABCC4O15439 AL049637.2-201ENST00000641778 930 ntBASIC25.29■■□□□ 1.64
ABCC4O15439 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.29■■□□□ 1.64
ABCC4O15439 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ABCC4O15439 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.28■■□□□ 1.64
ABCC4O15439 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
ABCC4O15439 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.28■■□□□ 1.64
ABCC4O15439 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.28■■□□□ 1.64
ABCC4O15439 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.28■■□□□ 1.64
ABCC4O15439 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ABCC4O15439 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.28■■□□□ 1.64
ABCC4O15439 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.27■■□□□ 1.64
ABCC4O15439 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.27■■□□□ 1.64
ABCC4O15439 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 KRT16P6-202ENST00000425692 1426 ntBASIC25.27■■□□□ 1.64
ABCC4O15439 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.27■■□□□ 1.64
ABCC4O15439 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.27■■□□□ 1.64
ABCC4O15439 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.27■■□□□ 1.64
ABCC4O15439 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCC4O15439 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ABCC4O15439 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ABCC4O15439 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ABCC4O15439 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
ABCC4O15439 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ABCC4O15439 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ABCC4O15439 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.26■■□□□ 1.63
ABCC4O15439 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
ABCC4O15439 AC110285.5-201ENST00000611501 352 ntBASIC25.26■■□□□ 1.63
ABCC4O15439 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.26■■□□□ 1.63
ABCC4O15439 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ABCC4O15439 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ABCC4O15439 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.25■■□□□ 1.63
ABCC4O15439 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ABCC4O15439 FAM210CP-201ENST00000445714 574 ntBASIC25.25■■□□□ 1.63
ABCC4O15439 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ABCC4O15439 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.25■■□□□ 1.63
ABCC4O15439 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.25■■□□□ 1.63
ABCC4O15439 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
ABCC4O15439 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.25■■□□□ 1.63
ABCC4O15439 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ABCC4O15439 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
ABCC4O15439 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
ABCC4O15439 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.24■■□□□ 1.63
ABCC4O15439 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.24■■□□□ 1.63
ABCC4O15439 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.24■■□□□ 1.63
ABCC4O15439 LINC01023-201ENST00000606054 436 ntBASIC25.24■■□□□ 1.63
ABCC4O15439 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ABCC4O15439 AC113410.3-201ENST00000623366 203 ntBASIC25.24■■□□□ 1.63
ABCC4O15439 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms