Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMX2-CTNND1H3BSU7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.41■□□□□ 0.7
TMX2-CTNND1H3BSU7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 TSPY7P-201ENST00000431358 1114 ntBASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMX2-CTNND1H3BSU7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms