Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CGB1A6NKQ9 HCG11-201ENST00000411553 5696 ntBASIC15.83■□□□□ 0.12
CGB1A6NKQ9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 AC080038.1-201ENST00000611274 1154 ntBASIC15.82■□□□□ 0.12
CGB1A6NKQ9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 AC009237.14-201ENST00000609975 1594 ntBASIC15.82■□□□□ 0.12
CGB1A6NKQ9 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.82■□□□□ 0.12
CGB1A6NKQ9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.82■□□□□ 0.12
CGB1A6NKQ9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 CDCA4P2-201ENST00000441182 718 ntBASIC15.81■□□□□ 0.12
CGB1A6NKQ9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 C2orf69P4-201ENST00000565394 541 ntBASIC15.81■□□□□ 0.12
CGB1A6NKQ9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 AL589743.5-201ENST00000616611 1050 ntBASIC15.81■□□□□ 0.12
CGB1A6NKQ9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CGB1A6NKQ9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.8■□□□□ 0.12
CGB1A6NKQ9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 AC133552.2-202ENST00000575694 574 ntBASIC15.8■□□□□ 0.12
CGB1A6NKQ9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.8■□□□□ 0.12
CGB1A6NKQ9 RAP2CP1-201ENST00000605103 478 ntBASIC15.8■□□□□ 0.12
CGB1A6NKQ9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.8■□□□□ 0.12
CGB1A6NKQ9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.79■□□□□ 0.12
CGB1A6NKQ9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms