Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 MCRIP2P1-201ENST00000394346 511 ntBASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-5A0A0J9YX44 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 PHGDH-210ENST00000641115 1638 ntBASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-5A0A0J9YX44 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC105020.6-201ENST00000621523 1217 ntBASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-5A0A0J9YX44 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 HLA-G-202ENST00000376815 851 ntBASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 HLA-G-203ENST00000376818 1127 ntBASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC013268.1-206ENST00000638368 961 ntBASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC112229.1-201ENST00000639295 961 ntBASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-5A0A0J9YX44 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms