Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 AC008694.1-202ENST00000636953 945 ntBASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV3A0A0B4J244 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 AC007322.1-201ENST00000426983 750 ntBASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 AL162430.1-201ENST00000480705 870 ntBASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV3A0A0B4J244 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 BX323043.1-201ENST00000641006 1765 ntBASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 KRT17P1-201ENST00000399211 1546 ntBASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 AC093787.1-201ENST00000450396 207 ntBASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 AC231657.2-201ENST00000624556 255 ntBASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 AC010980.2-201ENST00000587099 1412 ntBASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV3A0A0B4J244 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms