Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 AC009237.3-201ENST00000393279 1427 ntBASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 AC103834.1-201ENST00000520383 144 ntBASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 NTF6A-201ENST00000591175 560 ntBASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 AC099791.2-201ENST00000605725 427 ntBASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 MIR2861-201ENST00000636310 90 ntBASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 BX119927.1-201ENST00000636596 1552 ntBASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 AL032819.2-201ENST00000624543 2162 ntBASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 TSPY13P-201ENST00000338964 914 ntBASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 AC092171.4-201ENST00000609130 632 ntBASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-2A0A0B4J235 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV13-2A0A0B4J235 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms