Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 MRRFP1-201ENST00000435941 1675 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 AL355377.1-201ENST00000621125 1653 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 VDAC1P2-201ENST00000423609 850 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 DUTP4-201ENST00000424782 475 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 VDAC1P6-201ENST00000430062 855 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 MRPS16P1-201ENST00000523462 412 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 OR6M2P-201ENST00000529831 871 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 AC100827.5-201ENST00000615883 426 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 HIGD1AP8-201ENST00000453927 274 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 AL049779.2-201ENST00000553847 315 ntBASIC6.33□□□□□ -1.4
CHD7Q9P2D1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CHD7Q9P2D1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 ERG-206ENST00000398911 4914 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AC023245.1-201ENST00000468501 517 ntBASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AC079841.1-201ENST00000481228 950 ntBASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AL049840.6-201ENST00000604583 345 ntBASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.32□□□□□ -1.4
CHD7Q9P2D1 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AC106800.2-201ENST00000514009 1103 ntBASIC6.32□□□□□ -1.4
CHD7Q9P2D1 RNU6-615P-201ENST00000516065 106 ntBASIC6.32□□□□□ -1.4
CHD7Q9P2D1 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CHD7Q9P2D1 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 AC110373.1-201ENST00000505994 3505 ntBASIC6.31□□□□□ -1.4
CHD7Q9P2D1 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 RNA5SP339-201ENST00000390987 122 ntBASIC6.31□□□□□ -1.4
CHD7Q9P2D1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 AC016027.4-201ENST00000450866 277 ntBASIC6.31□□□□□ -1.4
CHD7Q9P2D1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 AC137768.1-201ENST00000549998 553 ntBASIC6.31□□□□□ -1.4
CHD7Q9P2D1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 AC024651.2-201ENST00000562480 2098 ntBASIC6.31□□□□□ -1.4
CHD7Q9P2D1 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD7Q9P2D1 BIN2P1-201ENST00000504996 1530 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms