RNA–Protein interactions for RNA: ENST00000551118.6

DNA2-208, Transcript of DNA replication helicase/nuclease 2, humanhuman

TSL 5 BASIC

Gene DNA2, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNA2-208ENST00000551118 NISCHQ9Y2I1 1504 aa13.6□□□□□ -0.23
DNA2-208ENST00000551118 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
DNA2-208ENST00000551118 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
DNA2-208ENST00000551118 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
DNA2-208ENST00000551118 HRCP23327 699 aa11.6□□□□□ -0.55
DNA2-208ENST00000551118 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
DNA2-208ENST00000551118 ZCCHC6Q5VYS8 1495 aaKnown RBP11.56□□□□□ -0.56
DNA2-208ENST00000551118 CHIC1Q5VXU3 224 aa11.5□□□□□ -0.57
DNA2-208ENST00000551118 PCGF6Q9BYE7 350 aa11.45□□□□□ -0.58
DNA2-208ENST00000551118 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
DNA2-208ENST00000551118 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
DNA2-208ENST00000551118 DCAF8L2P0C7V8 631 aa11.29□□□□□ -0.6
DNA2-208ENST00000551118 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.61
DNA2-208ENST00000551118 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
DNA2-208ENST00000551118 ABCC9O60706 1549 aa10.99□□□□□ -0.65
DNA2-208ENST00000551118 ZEB1P37275 1124 aaPredicted RBP10.96□□□□□ -0.65
DNA2-208ENST00000551118 PELP1Q8IZL8 1130 aaKnown RBP10.9□□□□□ -0.66
DNA2-208ENST00000551118 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
DNA2-208ENST00000551118 RSF1Q96T23 1441 aaPredicted RBP10.88□□□□□ -0.67
DNA2-208ENST00000551118 SCAF1Q9H7N4 1312 aaKnown RBP10.87□□□□□ -0.67
DNA2-208ENST00000551118 FAM9AQ8IZU1 332 aaPredicted RBP10.87□□□□□ -0.67
DNA2-208ENST00000551118 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
DNA2-208ENST00000551118 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
DNA2-208ENST00000551118 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
DNA2-208ENST00000551118 AEBP2Q6ZN18 517 aaPredicted RBP10.74□□□□□ -0.69
DNA2-208ENST00000551118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.68□□□□□ -0.7
DNA2-208ENST00000551118 NACADO15069 1562 aa10.67□□□□□ -0.7
DNA2-208ENST00000551118 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
DNA2-208ENST00000551118 CCER1Q8TC90 406 aaPredicted RBP10.65□□□□□ -0.7
DNA2-208ENST00000551118 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.7
DNA2-208ENST00000551118 NEUROD1Q13562 356 aa10.64□□□□□ -0.71
DNA2-208ENST00000551118 CECR2Q9BXF3 1484 aa10.63□□□□□ -0.71
DNA2-208ENST00000551118 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
DNA2-208ENST00000551118 WIZO95785 1651 aa10.59□□□□□ -0.71
DNA2-208ENST00000551118 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
DNA2-208ENST00000551118 GTF3C3Q9Y5Q9 886 aa10.57□□□□□ -0.72
DNA2-208ENST00000551118 BAZ1AQ9NRL2 1556 aaPredicted RBP10.55□□□□□ -0.72
DNA2-208ENST00000551118 CENPBP07199 599 aaPredicted RBP10.55□□□□□ -0.72
DNA2-208ENST00000551118 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
DNA2-208ENST00000551118 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
DNA2-208ENST00000551118 CEP162Q5TB80 1403 aa10.47□□□□□ -0.73
DNA2-208ENST00000551118 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
DNA2-208ENST00000551118 CCDC88BA6NC98 1476 aa10.45□□□□□ -0.74
DNA2-208ENST00000551118 UNC13AQ9UPW8 1703 aa10.44□□□□□ -0.74
DNA2-208ENST00000551118 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
DNA2-208ENST00000551118 MYT1Q01538 1121 aa10.41□□□□□ -0.74
DNA2-208ENST00000551118 YTHDC1Q96MU7 727 aaKnown RBP10.4□□□□□ -0.74
DNA2-208ENST00000551118 SOGA1O94964 1423 aa10.4□□□□□ -0.74
DNA2-208ENST00000551118 TNIKQ9UKE5 1360 aa10.39□□□□□ -0.75
DNA2-208ENST00000551118 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
DNA2-208ENST00000551118 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
DNA2-208ENST00000551118 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
DNA2-208ENST00000551118 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
DNA2-208ENST00000551118 RUSC2Q8N2Y8 1516 aa10.34□□□□□ -0.75
DNA2-208ENST00000551118 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
DNA2-208ENST00000551118 PEG3Q9GZU2 1588 aa10.32□□□□□ -0.76
DNA2-208ENST00000551118 EEA1Q15075 1411 aa10.32□□□□□ -0.76
DNA2-208ENST00000551118 MIER1Q8N108 512 aa10.32□□□□□ -0.76
DNA2-208ENST00000551118 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
DNA2-208ENST00000551118 HNRNPUL2Q1KMD3 747 aaKnown RBP10.3□□□□□ -0.76
DNA2-208ENST00000551118 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
DNA2-208ENST00000551118 CLIP1P30622 1438 aa10.21□□□□□ -0.78
DNA2-208ENST00000551118 KIF21BO75037 1637 aa10.21□□□□□ -0.78
DNA2-208ENST00000551118 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
DNA2-208ENST00000551118 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
DNA2-208ENST00000551118 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
DNA2-208ENST00000551118 APLP2Q06481 763 aa10.16□□□□□ -0.78
DNA2-208ENST00000551118 RANGAP1P46060 587 aaPredicted RBP10.14□□□□□ -0.79
DNA2-208ENST00000551118 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
DNA2-208ENST00000551118 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
DNA2-208ENST00000551118 SUPT16HQ9Y5B9 1047 aaKnown RBP10.11□□□□□ -0.79
DNA2-208ENST00000551118 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
DNA2-208ENST00000551118 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
DNA2-208ENST00000551118 BIVM-ERCC5R4GMW8 1640 aa10.06□□□□□ -0.8
DNA2-208ENST00000551118 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
DNA2-208ENST00000551118 ARAP1Q96P48 1450 aa10.02□□□□□ -0.81
DNA2-208ENST00000551118 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
DNA2-208ENST00000551118 PRDM2Q13029 1718 aa10.01□□□□□ -0.81
DNA2-208ENST00000551118 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
DNA2-208ENST00000551118 TOP2BQ02880 1626 aa10□□□□□ -0.81
DNA2-208ENST00000551118 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
DNA2-208ENST00000551118 ERICH3Q5RHP9 1530 aa9.98□□□□□ -0.81
DNA2-208ENST00000551118 RRBP1Q9P2E9 1410 aaKnown RBP9.98□□□□□ -0.81
DNA2-208ENST00000551118 PRXQ9BXM0 1461 aa9.97□□□□□ -0.81
DNA2-208ENST00000551118 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
DNA2-208ENST00000551118 CUX2O14529 1486 aa9.95□□□□□ -0.82
DNA2-208ENST00000551118 ITGAEP38570 1179 aa9.94□□□□□ -0.82
DNA2-208ENST00000551118 CCNB3Q8WWL7 1395 aa9.94□□□□□ -0.82
DNA2-208ENST00000551118 ANP32EQ9BTT0 268 aa9.94□□□□□ -0.82
DNA2-208ENST00000551118 BCANQ96GW7 911 aa9.92□□□□□ -0.82
DNA2-208ENST00000551118 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
DNA2-208ENST00000551118 MAPKBP1O60336 1514 aa9.91□□□□□ -0.82
DNA2-208ENST00000551118 RAB3GAP2Q9H2M9 1393 aa9.9□□□□□ -0.83
DNA2-208ENST00000551118 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
DNA2-208ENST00000551118 FKBP8Q14318 412 aa9.88□□□□□ -0.83
DNA2-208ENST00000551118 CUX1P39880 1505 aa9.87□□□□□ -0.83
DNA2-208ENST00000551118 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
DNA2-208ENST00000551118 DDX10Q13206 875 aaKnown RBP9.86□□□□□ -0.83
DNA2-208ENST00000551118 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
DNA2-208ENST00000551118 TIAM1Q13009 1591 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms