RNA–Protein interactions for RNA: ENST00000390396.1

TRBV23-1-201, Transcript of T cell receptor beta variable 23-1 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRBV23-1, Length 347 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1-201ENST00000390396 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
TRBV23-1-201ENST00000390396 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
TRBV23-1-201ENST00000390396 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
TRBV23-1-201ENST00000390396 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
TRBV23-1-201ENST00000390396 NISCHQ9Y2I1 1504 aa14.01□□□□□ -0.17
TRBV23-1-201ENST00000390396 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
TRBV23-1-201ENST00000390396 FOXD1Q16676 465 aa13.25□□□□□ -0.29
TRBV23-1-201ENST00000390396 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
TRBV23-1-201ENST00000390396 ADRA2BP18089 450 aa12.82□□□□□ -0.36
TRBV23-1-201ENST00000390396 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
TRBV23-1-201ENST00000390396 CCDC180Q9P1Z9 1646 aa12.3□□□□□ -0.44
TRBV23-1-201ENST00000390396 ABCC9O60706 1549 aa12.19□□□□□ -0.46
TRBV23-1-201ENST00000390396 MSH5O43196 834 aa12.09□□□□□ -0.47
TRBV23-1-201ENST00000390396 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
TRBV23-1-201ENST00000390396 PPP4R3CPQ6ZMV5 832 aa11.79□□□□□ -0.52
TRBV23-1-201ENST00000390396 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
TRBV23-1-201ENST00000390396 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
TRBV23-1-201ENST00000390396 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
TRBV23-1-201ENST00000390396 NACADO15069 1562 aa11.6□□□□□ -0.55
TRBV23-1-201ENST00000390396 KCNA4P22459 653 aa11.58□□□□□ -0.56
TRBV23-1-201ENST00000390396 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
TRBV23-1-201ENST00000390396 SCAF1Q9H7N4 1312 aaKnown RBP11.57□□□□□ -0.56
TRBV23-1-201ENST00000390396 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRBV23-1-201ENST00000390396 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
TRBV23-1-201ENST00000390396 MYO15BQ96JP2 1530 aa11.47□□□□□ -0.57
TRBV23-1-201ENST00000390396 SCRIBQ14160 1630 aa11.42□□□□□ -0.58
TRBV23-1-201ENST00000390396 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
TRBV23-1-201ENST00000390396 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
TRBV23-1-201ENST00000390396 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
TRBV23-1-201ENST00000390396 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
TRBV23-1-201ENST00000390396 UNC13AQ9UPW8 1703 aa11.34□□□□□ -0.59
TRBV23-1-201ENST00000390396 NPM3O75607 178 aaKnown RBP11.32□□□□□ -0.6
TRBV23-1-201ENST00000390396 BICRAQ9NZM4 1560 aa11.28□□□□□ -0.6
TRBV23-1-201ENST00000390396 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
TRBV23-1-201ENST00000390396 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
TRBV23-1-201ENST00000390396 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
TRBV23-1-201ENST00000390396 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
TRBV23-1-201ENST00000390396 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
TRBV23-1-201ENST00000390396 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
TRBV23-1-201ENST00000390396 CC2D2AQ9P2K1 1620 aa10.94□□□□□ -0.66
TRBV23-1-201ENST00000390396 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
TRBV23-1-201ENST00000390396 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
TRBV23-1-201ENST00000390396 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
TRBV23-1-201ENST00000390396 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
TRBV23-1-201ENST00000390396 ATAD2BQ9ULI0 1458 aa10.79□□□□□ -0.68
TRBV23-1-201ENST00000390396 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.69
TRBV23-1-201ENST00000390396 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
TRBV23-1-201ENST00000390396 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
TRBV23-1-201ENST00000390396 WIZO95785 1651 aa10.75□□□□□ -0.69
TRBV23-1-201ENST00000390396 NCAPD3P42695 1498 aa10.73□□□□□ -0.69
TRBV23-1-201ENST00000390396 SMARCA2P51531 1590 aa10.73□□□□□ -0.69
TRBV23-1-201ENST00000390396 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
TRBV23-1-201ENST00000390396 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
TRBV23-1-201ENST00000390396 ZBTB22O15209 634 aa10.69□□□□□ -0.7
TRBV23-1-201ENST00000390396 PEG3Q9GZU2 1588 aa10.65□□□□□ -0.7
TRBV23-1-201ENST00000390396 HMGXB3Q12766 1538 aa10.64□□□□□ -0.71
TRBV23-1-201ENST00000390396 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
TRBV23-1-201ENST00000390396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRBV23-1-201ENST00000390396 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
TRBV23-1-201ENST00000390396 NESP48681 1621 aa10.57□□□□□ -0.72
TRBV23-1-201ENST00000390396 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
TRBV23-1-201ENST00000390396 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
TRBV23-1-201ENST00000390396 CADPSQ9ULU8 1353 aa10.48□□□□□ -0.73
TRBV23-1-201ENST00000390396 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
TRBV23-1-201ENST00000390396 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
TRBV23-1-201ENST00000390396 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
TRBV23-1-201ENST00000390396 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
TRBV23-1-201ENST00000390396 PDS5BQ9NTI5 1447 aa10.4□□□□□ -0.75
TRBV23-1-201ENST00000390396 CFTRP13569 1480 aa10.39□□□□□ -0.75
TRBV23-1-201ENST00000390396 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
TRBV23-1-201ENST00000390396 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
TRBV23-1-201ENST00000390396 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
TRBV23-1-201ENST00000390396 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
TRBV23-1-201ENST00000390396 MRC2Q9UBG0 1479 aa10.29□□□□□ -0.76
TRBV23-1-201ENST00000390396 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
TRBV23-1-201ENST00000390396 ATF5Q9Y2D1 282 aaPredicted RBP10.26□□□□□ -0.77
TRBV23-1-201ENST00000390396 URB2Q14146 1524 aaKnown RBP10.26□□□□□ -0.77
TRBV23-1-201ENST00000390396 C1QBPQ07021 282 aaKnown RBP10.25□□□□□ -0.77
TRBV23-1-201ENST00000390396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.22□□□□□ -0.77
TRBV23-1-201ENST00000390396 HNRNPUL2Q1KMD3 747 aaKnown RBP10.22□□□□□ -0.77
TRBV23-1-201ENST00000390396 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
TRBV23-1-201ENST00000390396 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
TRBV23-1-201ENST00000390396 PRDM2Q13029 1718 aa10.21□□□□□ -0.77
TRBV23-1-201ENST00000390396 CUX2O14529 1486 aa10.21□□□□□ -0.78
TRBV23-1-201ENST00000390396 WDR62O43379 1518 aa10.2□□□□□ -0.78
TRBV23-1-201ENST00000390396 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
TRBV23-1-201ENST00000390396 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
TRBV23-1-201ENST00000390396 CUX1P39880 1505 aa10.17□□□□□ -0.78
TRBV23-1-201ENST00000390396 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
TRBV23-1-201ENST00000390396 ATXN8OSP0DMR3 200 aa10.15□□□□□ -0.78
TRBV23-1-201ENST00000390396 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.78
TRBV23-1-201ENST00000390396 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
TRBV23-1-201ENST00000390396 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
TRBV23-1-201ENST00000390396 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
TRBV23-1-201ENST00000390396 CAPN15O75808 1086 aa10.13□□□□□ -0.79
TRBV23-1-201ENST00000390396 SOGA1O94964 1423 aa10.13□□□□□ -0.79
TRBV23-1-201ENST00000390396 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
TRBV23-1-201ENST00000390396 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
TRBV23-1-201ENST00000390396 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
TRBV23-1-201ENST00000390396 TDRD9Q8NDG6 1382 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms