Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 AL035555.1-201ENST00000404462 1790 ntBASIC6.45□□□□□ -1.38
CHD7Q9P2D1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 AL592429.1-201ENST00000403909 1473 ntBASIC6.45□□□□□ -1.38
CHD7Q9P2D1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 AL606490.1-201ENST00000452266 765 ntBASIC6.45□□□□□ -1.38
CHD7Q9P2D1 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 AC108161.1-201ENST00000461060 402 ntBASIC6.45□□□□□ -1.38
CHD7Q9P2D1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.45□□□□□ -1.38
CHD7Q9P2D1 MIR6820-201ENST00000611508 62 ntBASIC6.45□□□□□ -1.38
CHD7Q9P2D1 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC005332.9-201ENST00000620266 2921 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AL133445.1-201ENST00000467051 452 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 PTTG3P-201ENST00000521862 606 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC025171.4-201ENST00000607250 1047 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AP001541.1-201ENST00000623322 1904 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC092111.1-201ENST00000618256 3358 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 RNA5SP156-201ENST00000410250 110 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 CYP4F32P-201ENST00000426492 504 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 RN7SL172P-201ENST00000460535 303 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AL157777.1-201ENST00000468100 304 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 RN7SL561P-201ENST00000488553 281 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 HIGD1AP5-201ENST00000529959 259 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 CR383656.6-201ENST00000550518 394 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 HMGN2P6-201ENST00000551091 273 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 MIR4505-201ENST00000582238 73 ntBASIC6.44□□□□□ -1.38
CHD7Q9P2D1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHD7Q9P2D1 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 EIF2S2P3-201ENST00000428356 999 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 NENFP3-201ENST00000503735 313 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AC018552.1-201ENST00000562099 811 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AL953862.2-201ENST00000603089 820 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AL121612.2-201ENST00000612261 482 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 SRRM1P3-201ENST00000426911 2678 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms