RNA–Protein interactions for RNA: ENST00000508879.5

LINC02200-202, Transcript of long intergenic non-protein coding RNA 2200, humanhuman

TSL 3 BASIC

Gene LINC02200, Length 615 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02200-202ENST00000508879 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
LINC02200-202ENST00000508879 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
LINC02200-202ENST00000508879 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
LINC02200-202ENST00000508879 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
LINC02200-202ENST00000508879 FOXD1Q16676 465 aa16.7■□□□□ 0.26
LINC02200-202ENST00000508879 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
LINC02200-202ENST00000508879 MSH5O43196 834 aa15.81■□□□□ 0.12
LINC02200-202ENST00000508879 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
LINC02200-202ENST00000508879 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
LINC02200-202ENST00000508879 ADRA2BP18089 450 aa15.13■□□□□ 0.01
LINC02200-202ENST00000508879 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
LINC02200-202ENST00000508879 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
LINC02200-202ENST00000508879 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
LINC02200-202ENST00000508879 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
LINC02200-202ENST00000508879 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
LINC02200-202ENST00000508879 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
LINC02200-202ENST00000508879 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
LINC02200-202ENST00000508879 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
LINC02200-202ENST00000508879 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
LINC02200-202ENST00000508879 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
LINC02200-202ENST00000508879 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
LINC02200-202ENST00000508879 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
LINC02200-202ENST00000508879 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
LINC02200-202ENST00000508879 ABCC9O60706 1549 aa13.04□□□□□ -0.32
LINC02200-202ENST00000508879 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
LINC02200-202ENST00000508879 NISCHQ9Y2I1 1504 aa12.79□□□□□ -0.36
LINC02200-202ENST00000508879 POTEHQ6S545 545 aa12.71□□□□□ -0.37
LINC02200-202ENST00000508879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC02200-202ENST00000508879 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
LINC02200-202ENST00000508879 DSG3P32926 999 aa12.43□□□□□ -0.42
LINC02200-202ENST00000508879 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
LINC02200-202ENST00000508879 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
LINC02200-202ENST00000508879 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
LINC02200-202ENST00000508879 CAPN15O75808 1086 aa12.35□□□□□ -0.43
LINC02200-202ENST00000508879 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC02200-202ENST00000508879 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
LINC02200-202ENST00000508879 ABCB7O75027 752 aa12.02□□□□□ -0.49
LINC02200-202ENST00000508879 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
LINC02200-202ENST00000508879 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
LINC02200-202ENST00000508879 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
LINC02200-202ENST00000508879 APLP2Q06481 763 aa11.94□□□□□ -0.5
LINC02200-202ENST00000508879 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
LINC02200-202ENST00000508879 CECR2Q9BXF3 1484 aa11.81□□□□□ -0.52
LINC02200-202ENST00000508879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
LINC02200-202ENST00000508879 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
LINC02200-202ENST00000508879 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
LINC02200-202ENST00000508879 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
LINC02200-202ENST00000508879 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
LINC02200-202ENST00000508879 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
LINC02200-202ENST00000508879 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
LINC02200-202ENST00000508879 KCNA4P22459 653 aa11.64□□□□□ -0.55
LINC02200-202ENST00000508879 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
LINC02200-202ENST00000508879 POLA2Q14181 598 aa11.58□□□□□ -0.56
LINC02200-202ENST00000508879 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
LINC02200-202ENST00000508879 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
LINC02200-202ENST00000508879 CUX2O14529 1486 aa11.51□□□□□ -0.57
LINC02200-202ENST00000508879 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
LINC02200-202ENST00000508879 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
LINC02200-202ENST00000508879 NACADO15069 1562 aa11.43□□□□□ -0.58
LINC02200-202ENST00000508879 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
LINC02200-202ENST00000508879 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
LINC02200-202ENST00000508879 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
LINC02200-202ENST00000508879 HAX1O00165 279 aa11.34□□□□□ -0.59
LINC02200-202ENST00000508879 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
LINC02200-202ENST00000508879 ERCC6Q03468 1493 aa11.28□□□□□ -0.6
LINC02200-202ENST00000508879 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC02200-202ENST00000508879 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
LINC02200-202ENST00000508879 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
LINC02200-202ENST00000508879 ILDR1Q86SU0 546 aaPredicted RBP11.26□□□□□ -0.61
LINC02200-202ENST00000508879 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
LINC02200-202ENST00000508879 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
LINC02200-202ENST00000508879 EVX2Q03828 476 aa11.2□□□□□ -0.62
LINC02200-202ENST00000508879 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
LINC02200-202ENST00000508879 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
LINC02200-202ENST00000508879 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
LINC02200-202ENST00000508879 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
LINC02200-202ENST00000508879 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
LINC02200-202ENST00000508879 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
LINC02200-202ENST00000508879 LHX8Q68G74 356 aa10.93□□□□□ -0.66
LINC02200-202ENST00000508879 NESP48681 1621 aa10.92□□□□□ -0.66
LINC02200-202ENST00000508879 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 GABBR2O75899 941 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 SCRIBQ14160 1630 aa10.9□□□□□ -0.66
LINC02200-202ENST00000508879 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
LINC02200-202ENST00000508879 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
LINC02200-202ENST00000508879 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
LINC02200-202ENST00000508879 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
LINC02200-202ENST00000508879 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
LINC02200-202ENST00000508879 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
LINC02200-202ENST00000508879 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
LINC02200-202ENST00000508879 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
LINC02200-202ENST00000508879 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
LINC02200-202ENST00000508879 FBLN2P98095 1184 aa10.78□□□□□ -0.68
LINC02200-202ENST00000508879 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
LINC02200-202ENST00000508879 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.69
LINC02200-202ENST00000508879 ATXN8OSP0DMR3 200 aa10.73□□□□□ -0.69
LINC02200-202ENST00000508879 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
LINC02200-202ENST00000508879 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms