RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 NISCHQ9Y2I1 1504 aa12.96□□□□□ -0.34
NOVA1-206ENST00000539517 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
NOVA1-206ENST00000539517 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
NOVA1-206ENST00000539517 CCDC180Q9P1Z9 1646 aa11.9□□□□□ -0.5
NOVA1-206ENST00000539517 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
NOVA1-206ENST00000539517 SHROOM4Q9ULL8 1493 aa11.32□□□□□ -0.6
NOVA1-206ENST00000539517 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
NOVA1-206ENST00000539517 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
NOVA1-206ENST00000539517 SUPT5HO00267 1087 aaKnown RBP11.01□□□□□ -0.65
NOVA1-206ENST00000539517 PHF23Q9BUL5 403 aaPredicted RBP10.99□□□□□ -0.65
NOVA1-206ENST00000539517 ZCCHC6Q5VYS8 1495 aaKnown RBP10.86□□□□□ -0.67
NOVA1-206ENST00000539517 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
NOVA1-206ENST00000539517 ABCC9O60706 1549 aa10.78□□□□□ -0.68
NOVA1-206ENST00000539517 NACADO15069 1562 aa10.74□□□□□ -0.69
NOVA1-206ENST00000539517 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
NOVA1-206ENST00000539517 RB1CC1Q8TDY2 1594 aa10.54□□□□□ -0.72
NOVA1-206ENST00000539517 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
NOVA1-206ENST00000539517 BICRAQ9NZM4 1560 aa10.47□□□□□ -0.73
NOVA1-206ENST00000539517 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
NOVA1-206ENST00000539517 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
NOVA1-206ENST00000539517 CECR2Q9BXF3 1484 aa10.29□□□□□ -0.76
NOVA1-206ENST00000539517 PEG3Q9GZU2 1588 aa10.28□□□□□ -0.76
NOVA1-206ENST00000539517 RSF1Q96T23 1441 aaPredicted RBP10.26□□□□□ -0.77
NOVA1-206ENST00000539517 FAM9AQ8IZU1 332 aaPredicted RBP10.26□□□□□ -0.77
NOVA1-206ENST00000539517 LOC105371045A0A1W2PR82 267 aa10.25□□□□□ -0.77
NOVA1-206ENST00000539517 PLPPR3Q6T4P5 718 aa10.23□□□□□ -0.77
NOVA1-206ENST00000539517 TRIM41Q8WV44 630 aa10.15□□□□□ -0.78
NOVA1-206ENST00000539517 MROH2BQ7Z745 1585 aa10.15□□□□□ -0.78
NOVA1-206ENST00000539517 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
NOVA1-206ENST00000539517 WIZO95785 1651 aa10.05□□□□□ -0.8
NOVA1-206ENST00000539517 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
NOVA1-206ENST00000539517 PCGF6Q9BYE7 350 aa9.97□□□□□ -0.81
NOVA1-206ENST00000539517 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
NOVA1-206ENST00000539517 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
NOVA1-206ENST00000539517 BAZ1AQ9NRL2 1556 aaPredicted RBP9.93□□□□□ -0.82
NOVA1-206ENST00000539517 TTBK1Q5TCY1 1321 aaPredicted RBP9.89□□□□□ -0.83
NOVA1-206ENST00000539517 CCDC88BA6NC98 1476 aa9.88□□□□□ -0.83
NOVA1-206ENST00000539517 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
NOVA1-206ENST00000539517 EIF4G1Q04637 1599 aaKnown RBP9.87□□□□□ -0.83
NOVA1-206ENST00000539517 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
NOVA1-206ENST00000539517 FOXD1Q16676 465 aa9.84□□□□□ -0.83
NOVA1-206ENST00000539517 ADRA2BP18089 450 aa9.84□□□□□ -0.83
NOVA1-206ENST00000539517 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
NOVA1-206ENST00000539517 ATAD2BQ9ULI0 1458 aa9.78□□□□□ -0.84
NOVA1-206ENST00000539517 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
NOVA1-206ENST00000539517 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
NOVA1-206ENST00000539517 BAZ1BQ9UIG0 1483 aaKnown RBP9.76□□□□□ -0.85
NOVA1-206ENST00000539517 PPP6R1Q9UPN7 881 aa9.75□□□□□ -0.85
NOVA1-206ENST00000539517 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
NOVA1-206ENST00000539517 SOGA1O94964 1423 aa9.74□□□□□ -0.85
NOVA1-206ENST00000539517 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
NOVA1-206ENST00000539517 NCAPD3P42695 1498 aa9.72□□□□□ -0.85
NOVA1-206ENST00000539517 RUSC2Q8N2Y8 1516 aa9.72□□□□□ -0.85
NOVA1-206ENST00000539517 WDR97A6NE52 1622 aa9.7□□□□□ -0.86
NOVA1-206ENST00000539517 CSRNP3Q8WYN3 585 aa9.68□□□□□ -0.86
NOVA1-206ENST00000539517 WRNQ14191 1432 aaPredicted RBP eCLIP9.66□□□□□ -0.86
NOVA1-206ENST00000539517 TRIM26Q12899 539 aaPredicted RBP9.64□□□□□ -0.87
NOVA1-206ENST00000539517 THOC2Q8NI27 1593 aaKnown RBP9.61□□□□□ -0.87
NOVA1-206ENST00000539517 LAMC3Q9Y6N6 1575 aa9.59□□□□□ -0.87
NOVA1-206ENST00000539517 HRCP23327 699 aa9.59□□□□□ -0.87
NOVA1-206ENST00000539517 SYNJ1O43426 1573 aa9.55□□□□□ -0.88
NOVA1-206ENST00000539517 CEP162Q5TB80 1403 aa9.51□□□□□ -0.89
NOVA1-206ENST00000539517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
NOVA1-206ENST00000539517 NESP48681 1621 aa9.5□□□□□ -0.89
NOVA1-206ENST00000539517 CADPSQ9ULU8 1353 aa9.48□□□□□ -0.89
NOVA1-206ENST00000539517 P3H3Q8IVL6 736 aa9.48□□□□□ -0.89
NOVA1-206ENST00000539517 PIAS4Q8N2W9 510 aaPredicted RBP9.48□□□□□ -0.89
NOVA1-206ENST00000539517 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
NOVA1-206ENST00000539517 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
NOVA1-206ENST00000539517 HNRNPUL2Q1KMD3 747 aaKnown RBP9.45□□□□□ -0.9
NOVA1-206ENST00000539517 CFTRP13569 1480 aa9.45□□□□□ -0.9
NOVA1-206ENST00000539517 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
NOVA1-206ENST00000539517 WDR62O43379 1518 aa9.45□□□□□ -0.9
NOVA1-206ENST00000539517 APLP2Q06481 763 aa9.44□□□□□ -0.9
NOVA1-206ENST00000539517 CUX1P39880 1505 aa9.43□□□□□ -0.9
NOVA1-206ENST00000539517 GOLGA3Q08378 1498 aa9.42□□□□□ -0.9
NOVA1-206ENST00000539517 CCER1Q8TC90 406 aaPredicted RBP9.41□□□□□ -0.9
NOVA1-206ENST00000539517 KIF21AQ7Z4S6 1674 aa9.4□□□□□ -0.9
NOVA1-206ENST00000539517 CLIP1P30622 1438 aa9.4□□□□□ -0.9
NOVA1-206ENST00000539517 BIVM-ERCC5R4GMW8 1640 aa9.4□□□□□ -0.9
NOVA1-206ENST00000539517 EEA1Q15075 1411 aa9.4□□□□□ -0.9
NOVA1-206ENST00000539517 CUX2O14529 1486 aa9.39□□□□□ -0.91
NOVA1-206ENST00000539517 CEP164Q9UPV0 1460 aa9.38□□□□□ -0.91
NOVA1-206ENST00000539517 FANCD2Q9BXW9 1451 aa9.38□□□□□ -0.91
NOVA1-206ENST00000539517 RAD54L2Q9Y4B4 1467 aa9.38□□□□□ -0.91
NOVA1-206ENST00000539517 ITGAEP38570 1179 aa9.38□□□□□ -0.91
NOVA1-206ENST00000539517 TDRD9Q8NDG6 1382 aaKnown RBP9.37□□□□□ -0.91
NOVA1-206ENST00000539517 KIF27Q86VH2 1401 aa9.37□□□□□ -0.91
NOVA1-206ENST00000539517 TOP2BQ02880 1626 aa9.36□□□□□ -0.91
NOVA1-206ENST00000539517 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
NOVA1-206ENST00000539517 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
NOVA1-206ENST00000539517 IGF1RP08069 1367 aa9.34□□□□□ -0.91
NOVA1-206ENST00000539517 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
NOVA1-206ENST00000539517 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
NOVA1-206ENST00000539517 KCNA4P22459 653 aa9.29□□□□□ -0.92
NOVA1-206ENST00000539517 FBLN2P98095 1184 aa9.28□□□□□ -0.92
NOVA1-206ENST00000539517 TARBP1Q13395 1621 aaKnown RBP9.28□□□□□ -0.92
NOVA1-206ENST00000539517 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
NOVA1-206ENST00000539517 POLA1P09884 1462 aaPredicted RBP9.26□□□□□ -0.93
NOVA1-206ENST00000539517 VPS8Q8N3P4 1428 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms