RNA–Protein interactions for RNA: ENST00000585739.1

LINC01533-201, Transcript of long intergenic non-protein coding RNA 1533, humanhuman

TSL 5 BASIC

Gene LINC01533, Length 616 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01533-201ENST00000585739 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
LINC01533-201ENST00000585739 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
LINC01533-201ENST00000585739 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
LINC01533-201ENST00000585739 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
LINC01533-201ENST00000585739 FOXD1Q16676 465 aa21.24■□□□□ 0.99
LINC01533-201ENST00000585739 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
LINC01533-201ENST00000585739 MSH5O43196 834 aa19.98■□□□□ 0.79
LINC01533-201ENST00000585739 PIAS4Q8N2W9 510 aaPredicted RBP19.67■□□□□ 0.74
LINC01533-201ENST00000585739 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
LINC01533-201ENST00000585739 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
LINC01533-201ENST00000585739 ADRA2BP18089 450 aa19.38■□□□□ 0.69
LINC01533-201ENST00000585739 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
LINC01533-201ENST00000585739 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
LINC01533-201ENST00000585739 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
LINC01533-201ENST00000585739 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
LINC01533-201ENST00000585739 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
LINC01533-201ENST00000585739 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
LINC01533-201ENST00000585739 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
LINC01533-201ENST00000585739 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
LINC01533-201ENST00000585739 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
LINC01533-201ENST00000585739 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
LINC01533-201ENST00000585739 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
LINC01533-201ENST00000585739 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
LINC01533-201ENST00000585739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC01533-201ENST00000585739 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
LINC01533-201ENST00000585739 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
LINC01533-201ENST00000585739 POTEHQ6S545 545 aa15.88■□□□□ 0.13
LINC01533-201ENST00000585739 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
LINC01533-201ENST00000585739 DSG3P32926 999 aa15.81■□□□□ 0.12
LINC01533-201ENST00000585739 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
LINC01533-201ENST00000585739 CAPN15O75808 1086 aa15.73■□□□□ 0.11
LINC01533-201ENST00000585739 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
LINC01533-201ENST00000585739 TRHP20396 242 aaPredicted RBP15.37■□□□□ 0.05
LINC01533-201ENST00000585739 ABCB7O75027 752 aa15.36■□□□□ 0.05
LINC01533-201ENST00000585739 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
LINC01533-201ENST00000585739 KCNA4P22459 653 aa15.26■□□□□ 0.03
LINC01533-201ENST00000585739 APLP2Q06481 763 aa15.23■□□□□ 0.03
LINC01533-201ENST00000585739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
LINC01533-201ENST00000585739 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
LINC01533-201ENST00000585739 SAMD1Q6SPF0 538 aaPredicted RBP15.04■□□□□ -0
LINC01533-201ENST00000585739 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
LINC01533-201ENST00000585739 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
LINC01533-201ENST00000585739 POLA2Q14181 598 aa14.86□□□□□ -0.03
LINC01533-201ENST00000585739 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
LINC01533-201ENST00000585739 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
LINC01533-201ENST00000585739 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
LINC01533-201ENST00000585739 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
LINC01533-201ENST00000585739 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
LINC01533-201ENST00000585739 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
LINC01533-201ENST00000585739 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
LINC01533-201ENST00000585739 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
LINC01533-201ENST00000585739 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
LINC01533-201ENST00000585739 FOXD4L1Q9NU39 408 aa14.34□□□□□ -0.11
LINC01533-201ENST00000585739 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
LINC01533-201ENST00000585739 HAX1O00165 279 aa14.33□□□□□ -0.12
LINC01533-201ENST00000585739 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC01533-201ENST00000585739 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
LINC01533-201ENST00000585739 EVX2Q03828 476 aa14.22□□□□□ -0.13
LINC01533-201ENST00000585739 ZBTB22O15209 634 aa14.06□□□□□ -0.16
LINC01533-201ENST00000585739 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
LINC01533-201ENST00000585739 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
LINC01533-201ENST00000585739 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
LINC01533-201ENST00000585739 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
LINC01533-201ENST00000585739 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
LINC01533-201ENST00000585739 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
LINC01533-201ENST00000585739 FBLN2P98095 1184 aa13.88□□□□□ -0.19
LINC01533-201ENST00000585739 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
LINC01533-201ENST00000585739 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
LINC01533-201ENST00000585739 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
LINC01533-201ENST00000585739 GABBR2O75899 941 aa13.81□□□□□ -0.2
LINC01533-201ENST00000585739 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
LINC01533-201ENST00000585739 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
LINC01533-201ENST00000585739 LHX8Q68G74 356 aa13.73□□□□□ -0.21
LINC01533-201ENST00000585739 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
LINC01533-201ENST00000585739 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
LINC01533-201ENST00000585739 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
LINC01533-201ENST00000585739 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC01533-201ENST00000585739 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
LINC01533-201ENST00000585739 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
LINC01533-201ENST00000585739 CLCN6P51797 869 aa13.32□□□□□ -0.28
LINC01533-201ENST00000585739 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
LINC01533-201ENST00000585739 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
LINC01533-201ENST00000585739 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
LINC01533-201ENST00000585739 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
LINC01533-201ENST00000585739 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
LINC01533-201ENST00000585739 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
LINC01533-201ENST00000585739 OTUD5Q96G74 571 aa13.13□□□□□ -0.31
LINC01533-201ENST00000585739 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
LINC01533-201ENST00000585739 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
LINC01533-201ENST00000585739 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
LINC01533-201ENST00000585739 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
LINC01533-201ENST00000585739 POTEMA6NI47 508 aa12.95□□□□□ -0.34
LINC01533-201ENST00000585739 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
LINC01533-201ENST00000585739 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
LINC01533-201ENST00000585739 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
LINC01533-201ENST00000585739 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
LINC01533-201ENST00000585739 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
LINC01533-201ENST00000585739 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
LINC01533-201ENST00000585739 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
LINC01533-201ENST00000585739 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms