Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AF213884.3-201ENST00000563833 479 ntBASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 AC020763.4-201ENST00000623414 4170 ntBASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD3-BMI1R4GMX3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 MIR939-201ENST00000401314 82 ntBASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 AL355001.2-201ENST00000620617 1191 ntBASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 BX005040.4-201ENST00000637145 1518 ntBASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD3-BMI1R4GMX3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 RASA4CP-201ENST00000424092 1398 ntBASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.58■□□□□ 0.57
COMMD3-BMI1R4GMX3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 MIR572-201ENST00000384983 95 ntBASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC091305.1-201ENST00000479476 895 ntBASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
COMMD3-BMI1R4GMX3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3-BMI1R4GMX3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms