Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 CD177P1-201ENST00000606252 935 ntBASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA9Q9Y5G4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 AC011484.1-201ENST00000377652 1995 ntBASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 NBPF21P-201ENST00000425093 1451 ntBASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 MMP23A-201ENST00000234610 1017 ntBASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 FEM1AP1-201ENST00000431297 1995 ntBASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA9Q9Y5G4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 AL121906.2-201ENST00000621597 723 ntBASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA9Q9Y5G4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 AC073195.1-201ENST00000607241 877 ntBASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA9Q9Y5G4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms