Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSM4Q9Y4Z0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 MIR4758-201ENST00000577688 71 ntBASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 AC013268.1-206ENST00000638368 961 ntBASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 AC112229.1-201ENST00000639295 961 ntBASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LSM4Q9Y4Z0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LSM4Q9Y4Z0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 TERF1P5-201ENST00000477545 1207 ntBASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 AC098934.4-201ENST00000564127 592 ntBASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LSM4Q9Y4Z0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms