Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HHLA3Q9XRX5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HHLA3Q9XRX5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 MFSD11-216ENST00000590393 1141 ntBASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HHLA3Q9XRX5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 AC007322.4-201ENST00000509611 723 ntBASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 AL137784.2-201ENST00000607332 1000 ntBASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.46□□□□□ -0.09
HHLA3Q9XRX5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HHLA3Q9XRX5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HHLA3Q9XRX5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HHLA3Q9XRX5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HHLA3Q9XRX5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.46□□□□□ -0.1
HHLA3Q9XRX5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HHLA3Q9XRX5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms