Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 AL157384.1-201ENST00000445995 2473 ntBASIC19.73■□□□□ 0.75
SPASTQ9UBP0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SPASTQ9UBP0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 AL121829.2-201ENST00000620908 328 ntBASIC19.72■□□□□ 0.75
SPASTQ9UBP0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPASTQ9UBP0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPASTQ9UBP0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 KRT17P2-201ENST00000300992 1314 ntBASIC19.7■□□□□ 0.74
SPASTQ9UBP0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms