Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF38Q9NXL2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF38Q9NXL2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF38Q9NXL2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF38Q9NXL2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARHGEF38Q9NXL2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.64■□□□□ 0.9
ARHGEF38Q9NXL2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ARHGEF38Q9NXL2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.64■□□□□ 0.9
ARHGEF38Q9NXL2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARHGEF38Q9NXL2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 POM121L13P-201ENST00000422362 380 ntBASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 TSPY20P-201ENST00000450910 630 ntBASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF38Q9NXL2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 RPS2P52-201ENST00000469610 820 ntBASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ARHGEF38Q9NXL2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 AC124283.5-201ENST00000624661 1809 ntBASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF38Q9NXL2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF38Q9NXL2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 AL691432.2-201ENST00000607222 2038 ntBASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF38Q9NXL2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms