Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
BRF2Q9HAW0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 NCF1B-203ENST00000435988 1254 ntBASIC18.98■□□□□ 0.63
BRF2Q9HAW0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.98■□□□□ 0.63
BRF2Q9HAW0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 SLC29A4P1-201ENST00000398760 971 ntBASIC18.97■□□□□ 0.63
BRF2Q9HAW0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 DUSP5P2-201ENST00000426873 1033 ntBASIC18.97■□□□□ 0.63
BRF2Q9HAW0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRF2Q9HAW0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 AL390719.1-204ENST00000412397 1219 ntBASIC18.96■□□□□ 0.63
BRF2Q9HAW0 GUSBP6-202ENST00000438529 1198 ntBASIC18.96■□□□□ 0.63
BRF2Q9HAW0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.96■□□□□ 0.63
BRF2Q9HAW0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.96■□□□□ 0.63
BRF2Q9HAW0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
BRF2Q9HAW0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.62
BRF2Q9HAW0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 TSPY6P-201ENST00000448518 926 ntBASIC18.95■□□□□ 0.62
BRF2Q9HAW0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 AC091874.3-201ENST00000512672 1195 ntBASIC18.95■□□□□ 0.62
BRF2Q9HAW0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 AC005829.2-201ENST00000571422 1056 ntBASIC18.95■□□□□ 0.62
BRF2Q9HAW0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
BRF2Q9HAW0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms