Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VCX3BQ9H321 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
VCX3BQ9H321 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VCX3BQ9H321 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VCX3BQ9H321 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.89■□□□□ 0.62
VCX3BQ9H321 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VCX3BQ9H321 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 AC010980.1-201ENST00000587192 1142 ntBASIC18.89■□□□□ 0.61
VCX3BQ9H321 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3BQ9H321 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3BQ9H321 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.88■□□□□ 0.61
VCX3BQ9H321 AC135050.7-201ENST00000624508 2218 ntBASIC18.88■□□□□ 0.61
VCX3BQ9H321 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3BQ9H321 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3BQ9H321 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3BQ9H321 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCX3BQ9H321 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 BX119927.1-201ENST00000636596 1552 ntBASIC18.87■□□□□ 0.61
VCX3BQ9H321 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
VCX3BQ9H321 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 MTDHP2-201ENST00000601468 714 ntBASIC18.86■□□□□ 0.61
VCX3BQ9H321 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 CROCCP3-202ENST00000420820 1947 ntBASIC18.86■□□□□ 0.61
VCX3BQ9H321 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
VCX3BQ9H321 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCX3BQ9H321 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms