Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.24■□□□□ 0.99
CDH23Q9H251 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.24■□□□□ 0.99
CDH23Q9H251 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDH23Q9H251 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
CDH23Q9H251 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 HMGA1P5-201ENST00000412453 271 ntBASIC21.23■□□□□ 0.99
CDH23Q9H251 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
CDH23Q9H251 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH23Q9H251 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH23Q9H251 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH23Q9H251 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDH23Q9H251 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH23Q9H251 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDH23Q9H251 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH23Q9H251 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH23Q9H251 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH23Q9H251 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH23Q9H251 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH23Q9H251 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.21■□□□□ 0.99
CDH23Q9H251 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH23Q9H251 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH23Q9H251 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH23Q9H251 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH23Q9H251 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH23Q9H251 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH23Q9H251 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH23Q9H251 AC092338.2-201ENST00000568827 1415 ntBASIC21.21■□□□□ 0.99
CDH23Q9H251 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDH23Q9H251 AC008622.2-201ENST00000617006 1229 ntBASIC21.2■□□□□ 0.99
CDH23Q9H251 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.2■□□□□ 0.99
CDH23Q9H251 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH23Q9H251 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 AC007663.1-201ENST00000438948 1240 ntBASIC21.2■□□□□ 0.98
CDH23Q9H251 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH23Q9H251 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CDH23Q9H251 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH23Q9H251 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH23Q9H251 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CDH23Q9H251 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.2■□□□□ 0.98
CDH23Q9H251 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.2■□□□□ 0.98
CDH23Q9H251 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH23Q9H251 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH23Q9H251 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDH23Q9H251 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH23Q9H251 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH23Q9H251 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH23Q9H251 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDH23Q9H251 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH23Q9H251 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CDH23Q9H251 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH23Q9H251 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CDH23Q9H251 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH23Q9H251 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH23Q9H251 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CDH23Q9H251 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH23Q9H251 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH23Q9H251 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH23Q9H251 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms