Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 SLC47A1P1-202ENST00000449666 945 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 AL033527.3-201ENST00000566366 1196 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 MIR6724-1-201ENST00000616420 92 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 MIR6724-2-201ENST00000616483 92 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 MIR6724-4-201ENST00000617390 92 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 MIR6724-3-201ENST00000622482 92 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 AP000997.3-201ENST00000623333 2250 ntBASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SEC22CQ9BRL7 AC135050.7-201ENST00000624508 2218 ntBASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 AC009237.3-201ENST00000393279 1427 ntBASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC22CQ9BRL7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 HCG11-201ENST00000411553 5696 ntBASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 AC011270.2-201ENST00000624293 2550 ntBASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC22CQ9BRL7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC22CQ9BRL7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms