Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC28.66■■■□□ 2.18
SCAF11Q99590 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC28.66■■■□□ 2.18
SCAF11Q99590 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC28.66■■■□□ 2.18
SCAF11Q99590 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC28.65■■■□□ 2.18
SCAF11Q99590 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC28.65■■■□□ 2.18
SCAF11Q99590 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 INGX-201ENST00000359239 846 ntBASIC28.65■■■□□ 2.18
SCAF11Q99590 DUSP5P1-201ENST00000441325 1139 ntBASIC28.65■■■□□ 2.18
SCAF11Q99590 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SCAF11Q99590 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SCAF11Q99590 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SCAF11Q99590 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC28.65■■■□□ 2.18
SCAF11Q99590 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.65■■■□□ 2.18
SCAF11Q99590 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SCAF11Q99590 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SCAF11Q99590 PTBP1P-201ENST00000554374 1601 ntBASIC28.64■■■□□ 2.18
SCAF11Q99590 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.64■■■□□ 2.18
SCAF11Q99590 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SCAF11Q99590 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC28.64■■■□□ 2.17
SCAF11Q99590 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.17
SCAF11Q99590 AC121338.2-201ENST00000622535 1744 ntBASIC28.64■■■□□ 2.17
SCAF11Q99590 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC28.63■■■□□ 2.17
SCAF11Q99590 AC128688.1-201ENST00000487626 519 ntBASIC28.63■■■□□ 2.17
SCAF11Q99590 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC28.63■■■□□ 2.17
SCAF11Q99590 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC28.63■■■□□ 2.17
SCAF11Q99590 AP000550.4-202ENST00000639755 178 ntBASIC28.63■■■□□ 2.17
SCAF11Q99590 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
SCAF11Q99590 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SCAF11Q99590 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC28.63■■■□□ 2.17
SCAF11Q99590 AF106564.1-201ENST00000607058 2553 ntBASIC28.63■■■□□ 2.17
SCAF11Q99590 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF11Q99590 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
SCAF11Q99590 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF11Q99590 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC28.62■■■□□ 2.17
SCAF11Q99590 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF11Q99590 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF11Q99590 COPS8-203ENST00000409334 794 ntTSL 5 BASIC28.62■■■□□ 2.17
SCAF11Q99590 AC091390.4-202ENST00000476426 537 ntBASIC28.62■■■□□ 2.17
SCAF11Q99590 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC28.62■■■□□ 2.17
SCAF11Q99590 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF11Q99590 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
SCAF11Q99590 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
SCAF11Q99590 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SCAF11Q99590 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC28.61■■■□□ 2.17
SCAF11Q99590 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC28.61■■■□□ 2.17
SCAF11Q99590 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
SCAF11Q99590 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
SCAF11Q99590 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SCAF11Q99590 KRT18P48-201ENST00000434763 852 ntBASIC28.61■■■□□ 2.17
SCAF11Q99590 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC28.61■■■□□ 2.17
SCAF11Q99590 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC28.61■■■□□ 2.17
SCAF11Q99590 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC28.61■■■□□ 2.17
SCAF11Q99590 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC28.61■■■□□ 2.17
SCAF11Q99590 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SCAF11Q99590 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SCAF11Q99590 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SCAF11Q99590 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC28.6■■■□□ 2.17
SCAF11Q99590 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC28.6■■■□□ 2.17
SCAF11Q99590 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC28.6■■■□□ 2.17
SCAF11Q99590 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SCAF11Q99590 AC026310.3-201ENST00000625186 2373 ntBASIC28.59■■■□□ 2.17
SCAF11Q99590 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
SCAF11Q99590 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
SCAF11Q99590 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC28.59■■■□□ 2.17
SCAF11Q99590 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC28.59■■■□□ 2.17
SCAF11Q99590 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC28.59■■■□□ 2.17
SCAF11Q99590 CLN6-204ENST00000564752 900 ntTSL 3 BASIC28.59■■■□□ 2.17
SCAF11Q99590 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC28.59■■■□□ 2.17
SCAF11Q99590 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC28.59■■■□□ 2.17
SCAF11Q99590 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC28.59■■■□□ 2.17
SCAF11Q99590 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SCAF11Q99590 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC28.59■■■□□ 2.17
SCAF11Q99590 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms