Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.1■□□□□ 0.49
SGCDQ92629 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.1■□□□□ 0.49
SGCDQ92629 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.1■□□□□ 0.49
SGCDQ92629 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.1■□□□□ 0.49
SGCDQ92629 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.1■□□□□ 0.49
SGCDQ92629 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SGCDQ92629 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SGCDQ92629 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.09■□□□□ 0.49
SGCDQ92629 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.09■□□□□ 0.49
SGCDQ92629 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.09■□□□□ 0.49
SGCDQ92629 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SGCDQ92629 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SGCDQ92629 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.09■□□□□ 0.49
SGCDQ92629 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SGCDQ92629 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SGCDQ92629 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGCDQ92629 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.09■□□□□ 0.49
SGCDQ92629 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
SGCDQ92629 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SGCDQ92629 KRT8P36-201ENST00000489121 1440 ntBASIC18.08■□□□□ 0.49
SGCDQ92629 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGCDQ92629 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.08■□□□□ 0.48
SGCDQ92629 AC131281.2-201ENST00000520478 145 ntBASIC18.08■□□□□ 0.48
SGCDQ92629 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.08■□□□□ 0.48
SGCDQ92629 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SGCDQ92629 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.08■□□□□ 0.48
SGCDQ92629 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SGCDQ92629 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGCDQ92629 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SGCDQ92629 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SGCDQ92629 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SGCDQ92629 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SGCDQ92629 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.07■□□□□ 0.48
SGCDQ92629 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SGCDQ92629 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SGCDQ92629 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SGCDQ92629 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SGCDQ92629 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.07■□□□□ 0.48
SGCDQ92629 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SGCDQ92629 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.07■□□□□ 0.48
SGCDQ92629 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCDQ92629 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.06■□□□□ 0.48
SGCDQ92629 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SGCDQ92629 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGCDQ92629 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms