Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM11BQ8TCY0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM11BQ8TCY0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM11BQ8TCY0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM11BQ8TCY0 SYT6-210ENST00000641643 1587 ntBASIC12.9□□□□□ -0.35
SMIM11BQ8TCY0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SMIM11BQ8TCY0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 AC092171.4-201ENST00000609130 632 ntBASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM11BQ8TCY0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 CROCCP3-202ENST00000420820 1947 ntBASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 AK3-203ENST00000447596 705 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 AC061975.6-201ENST00000579045 1553 ntBASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 PCDHB18P-201ENST00000524813 2368 ntBASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC12.88□□□□□ -0.35
SMIM11BQ8TCY0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 AC009113.1-201ENST00000570267 2443 ntBASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 AL033527.3-201ENST00000566366 1196 ntBASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SMIM11BQ8TCY0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms