Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP35Q8NFH5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NUP35Q8NFH5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.83□□□□□ -0.03
NUP35Q8NFH5 PCDHB18P-201ENST00000524813 2368 ntBASIC14.83□□□□□ -0.03
NUP35Q8NFH5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 AC135050.7-201ENST00000624508 2218 ntBASIC14.83□□□□□ -0.04
NUP35Q8NFH5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 RARRES2P11-201ENST00000635158 484 ntBASIC14.83□□□□□ -0.04
NUP35Q8NFH5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.83□□□□□ -0.04
NUP35Q8NFH5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 SERBP1P1-201ENST00000396021 1160 ntBASIC14.82□□□□□ -0.04
NUP35Q8NFH5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 FZD10-202ENST00000539839 3282 ntBASIC14.82□□□□□ -0.04
NUP35Q8NFH5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP35Q8NFH5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.81□□□□□ -0.04
NUP35Q8NFH5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 AL133373.2-201ENST00000623187 2828 ntBASIC14.81□□□□□ -0.04
NUP35Q8NFH5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 AC116050.2-201ENST00000612102 1779 ntBASIC14.81□□□□□ -0.04
NUP35Q8NFH5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 UNC93B8-201ENST00000511903 705 ntBASIC14.81□□□□□ -0.04
NUP35Q8NFH5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 KRT8P36-201ENST00000489121 1440 ntBASIC14.81□□□□□ -0.04
NUP35Q8NFH5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 AC009237.14-201ENST00000609975 1594 ntBASIC14.81□□□□□ -0.04
NUP35Q8NFH5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NUP35Q8NFH5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 AC020916.1-201ENST00000587762 1774 ntBASIC14.8□□□□□ -0.04
NUP35Q8NFH5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP35Q8NFH5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms