Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KHDC1Q4VXA5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KHDC1Q4VXA5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.07■□□□□ 0.8
KHDC1Q4VXA5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KHDC1Q4VXA5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KHDC1Q4VXA5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 AC097658.1-201ENST00000475555 843 ntBASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 C2orf69P4-201ENST00000565394 541 ntBASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KHDC1Q4VXA5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 AC099778.1-201ENST00000568593 1911 ntBASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.05■□□□□ 0.8
KHDC1Q4VXA5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 AP000974.1-201ENST00000623909 2387 ntBASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KHDC1Q4VXA5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 KRT18P6-201ENST00000555540 1265 ntBASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms