Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS1BP61024 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.85□□□□□ -0.19
CKS1BP61024 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS1BP61024 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CKS1BP61024 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS1BP61024 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CKS1BP61024 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.85□□□□□ -0.19
CKS1BP61024 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.85□□□□□ -0.19
CKS1BP61024 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CKS1BP61024 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CKS1BP61024 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.84□□□□□ -0.19
CKS1BP61024 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.84□□□□□ -0.19
CKS1BP61024 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.84□□□□□ -0.19
CKS1BP61024 SMUG1P1-201ENST00000590640 811 ntBASIC13.84□□□□□ -0.19
CKS1BP61024 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CKS1BP61024 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CKS1BP61024 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CKS1BP61024 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CKS1BP61024 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.84□□□□□ -0.19
CKS1BP61024 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CKS1BP61024 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS1BP61024 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CKS1BP61024 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CKS1BP61024 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CKS1BP61024 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CKS1BP61024 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CKS1BP61024 AC007225.1-201ENST00000566331 1836 ntBASIC13.83□□□□□ -0.2
CKS1BP61024 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CKS1BP61024 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS1BP61024 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 AC126544.1-201ENST00000580842 1059 ntBASIC13.83□□□□□ -0.2
CKS1BP61024 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.83□□□□□ -0.2
CKS1BP61024 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CKS1BP61024 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.83□□□□□ -0.2
CKS1BP61024 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CKS1BP61024 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS1BP61024 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CKS1BP61024 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS1BP61024 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.82□□□□□ -0.2
CKS1BP61024 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.82□□□□□ -0.2
CKS1BP61024 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CKS1BP61024 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS1BP61024 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.82□□□□□ -0.2
CKS1BP61024 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.82□□□□□ -0.2
CKS1BP61024 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms