Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX16P57768 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX16P57768 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
SNX16P57768 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX16P57768 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SNX16P57768 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX16P57768 TMEM179-206ENST00000616017 1645 ntBASIC20.96■□□□□ 0.95
SNX16P57768 PHGDH-210ENST00000641115 1638 ntBASIC20.96■□□□□ 0.95
SNX16P57768 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SNX16P57768 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SNX16P57768 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX16P57768 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX16P57768 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SNX16P57768 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX16P57768 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SNX16P57768 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX16P57768 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX16P57768 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.95■□□□□ 0.94
SNX16P57768 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX16P57768 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SNX16P57768 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX16P57768 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX16P57768 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
SNX16P57768 AL391422.3-201ENST00000603791 2761 ntBASIC20.95■□□□□ 0.94
SNX16P57768 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.94■□□□□ 0.94
SNX16P57768 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX16P57768 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.94■□□□□ 0.94
SNX16P57768 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.94■□□□□ 0.94
SNX16P57768 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SNX16P57768 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.94■□□□□ 0.94
SNX16P57768 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.94■□□□□ 0.94
SNX16P57768 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SNX16P57768 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.94■□□□□ 0.94
SNX16P57768 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SNX16P57768 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX16P57768 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX16P57768 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
SNX16P57768 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SNX16P57768 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SNX16P57768 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.93■□□□□ 0.94
SNX16P57768 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX16P57768 AC006557.6-201ENST00000623071 864 ntBASIC20.93■□□□□ 0.94
SNX16P57768 AL691432.2-201ENST00000607222 2038 ntBASIC20.93■□□□□ 0.94
SNX16P57768 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX16P57768 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX16P57768 AC009237.14-201ENST00000609975 1594 ntBASIC20.93■□□□□ 0.94
SNX16P57768 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX16P57768 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX16P57768 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX16P57768 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX16P57768 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX16P57768 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SNX16P57768 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX16P57768 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX16P57768 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX16P57768 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX16P57768 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX16P57768 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms