Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN17P56750 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN17P56750 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN17P56750 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN17P56750 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN17P56750 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN17P56750 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN17P56750 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN17P56750 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN17P56750 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDN17P56750 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN17P56750 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN17P56750 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN17P56750 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN17P56750 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN17P56750 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLDN17P56750 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN17P56750 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN17P56750 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN17P56750 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN17P56750 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN17P56750 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLDN17P56750 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN17P56750 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN17P56750 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN17P56750 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN17P56750 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN17P56750 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN17P56750 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN17P56750 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN17P56750 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.71■□□□□ 0.43
CLDN17P56750 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLDN17P56750 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CLDN17P56750 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN17P56750 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN17P56750 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN17P56750 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLDN17P56750 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CLDN17P56750 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN17P56750 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN17P56750 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN17P56750 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN17P56750 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN17P56750 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN17P56750 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN17P56750 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN17P56750 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CLDN17P56750 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN17P56750 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN17P56750 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms