Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HCFC1P51610 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.36■□□□□ 0.37
HCFC1P51610 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
HCFC1P51610 AC026271.3-201ENST00000571884 352 ntBASIC17.36■□□□□ 0.37
HCFC1P51610 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.36■□□□□ 0.37
HCFC1P51610 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
HCFC1P51610 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.36■□□□□ 0.37
HCFC1P51610 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.36■□□□□ 0.37
HCFC1P51610 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HCFC1P51610 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC1P51610 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC1P51610 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC1P51610 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HCFC1P51610 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC1P51610 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCFC1P51610 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC1P51610 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC1P51610 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC1P51610 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.35■□□□□ 0.37
HCFC1P51610 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HCFC1P51610 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCFC1P51610 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
HCFC1P51610 FEM1AP4-201ENST00000443167 1987 ntBASIC17.34■□□□□ 0.37
HCFC1P51610 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.34■□□□□ 0.37
HCFC1P51610 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC1P51610 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC1P51610 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC1P51610 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
HCFC1P51610 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC1P51610 WWOX-216ENST00000569818 525 ntBASIC17.34■□□□□ 0.37
HCFC1P51610 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC1P51610 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC1P51610 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.33■□□□□ 0.37
HCFC1P51610 KRT8P20-201ENST00000423953 1409 ntBASIC17.33■□□□□ 0.37
HCFC1P51610 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
HCFC1P51610 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 ECEL1P2-202ENST00000465689 757 ntBASIC17.33■□□□□ 0.37
HCFC1P51610 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.33■□□□□ 0.37
HCFC1P51610 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.33■□□□□ 0.37
HCFC1P51610 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 AC005229.4-201ENST00000610085 2198 ntBASIC17.33■□□□□ 0.37
HCFC1P51610 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HCFC1P51610 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC1P51610 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.33■□□□□ 0.37
HCFC1P51610 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.33■□□□□ 0.36
HCFC1P51610 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC1P51610 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC1P51610 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.33■□□□□ 0.36
HCFC1P51610 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.33■□□□□ 0.36
HCFC1P51610 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC1P51610 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.33■□□□□ 0.36
HCFC1P51610 AC005363.2-201ENST00000618631 242 ntBASIC17.33■□□□□ 0.36
HCFC1P51610 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC1P51610 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.32■□□□□ 0.36
HCFC1P51610 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC1P51610 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC1P51610 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HCFC1P51610 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.32■□□□□ 0.36
HCFC1P51610 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC1P51610 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC1P51610 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
HCFC1P51610 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC1P51610 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC1P51610 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.32■□□□□ 0.36
HCFC1P51610 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC1P51610 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC1P51610 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HCFC1P51610 AL024507.2-201ENST00000606070 2574 ntBASIC17.32■□□□□ 0.36
HCFC1P51610 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC1P51610 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.31■□□□□ 0.36
HCFC1P51610 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 DGCR10-201ENST00000609839 495 ntBASIC17.31■□□□□ 0.36
HCFC1P51610 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HCFC1P51610 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.31■□□□□ 0.36
HCFC1P51610 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC1P51610 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HCFC1P51610 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms