Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RXRGP48443 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RXRGP48443 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RXRGP48443 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.84■□□□□ 0.77
RXRGP48443 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RXRGP48443 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RXRGP48443 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.84■□□□□ 0.77
RXRGP48443 AC023632.3-201ENST00000521633 145 ntBASIC19.84■□□□□ 0.77
RXRGP48443 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.84■□□□□ 0.77
RXRGP48443 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.84■□□□□ 0.77
RXRGP48443 AC113410.3-201ENST00000623366 203 ntBASIC19.84■□□□□ 0.77
RXRGP48443 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.84■□□□□ 0.77
RXRGP48443 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RXRGP48443 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RXRGP48443 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.83■□□□□ 0.77
RXRGP48443 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.83■□□□□ 0.77
RXRGP48443 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RXRGP48443 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.83■□□□□ 0.77
RXRGP48443 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.83■□□□□ 0.77
RXRGP48443 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.83■□□□□ 0.77
RXRGP48443 AL121829.2-201ENST00000620908 328 ntBASIC19.83■□□□□ 0.77
RXRGP48443 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RXRGP48443 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RXRGP48443 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRGP48443 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRGP48443 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.83■□□□□ 0.76
RXRGP48443 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RXRGP48443 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RXRGP48443 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.82■□□□□ 0.76
RXRGP48443 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.82■□□□□ 0.76
RXRGP48443 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RXRGP48443 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RXRGP48443 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.82■□□□□ 0.76
RXRGP48443 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.82■□□□□ 0.76
RXRGP48443 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.82■□□□□ 0.76
RXRGP48443 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RXRGP48443 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RXRGP48443 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RXRGP48443 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.81■□□□□ 0.76
RXRGP48443 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.81■□□□□ 0.76
RXRGP48443 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.81■□□□□ 0.76
RXRGP48443 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.81■□□□□ 0.76
RXRGP48443 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RXRGP48443 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRGP48443 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.81■□□□□ 0.76
RXRGP48443 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RXRGP48443 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRGP48443 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms