Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-1P43699 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-1P43699 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX2-1P43699 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX2-1P43699 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX2-1P43699 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX2-1P43699 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
NKX2-1P43699 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.22■□□□□ 0.19
NKX2-1P43699 MIR572-201ENST00000384983 95 ntBASIC16.22■□□□□ 0.19
NKX2-1P43699 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 AL136162.1-201ENST00000607711 1078 ntBASIC16.22■□□□□ 0.19
NKX2-1P43699 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NKX2-1P43699 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NKX2-1P43699 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
NKX2-1P43699 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NKX2-1P43699 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.22■□□□□ 0.19
NKX2-1P43699 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX2-1P43699 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-1P43699 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NKX2-1P43699 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NKX2-1P43699 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-1P43699 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX2-1P43699 AC135279.3-201ENST00000610945 1311 ntBASIC16.21■□□□□ 0.19
NKX2-1P43699 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-1P43699 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-1P43699 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NKX2-1P43699 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX2-1P43699 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX2-1P43699 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-1P43699 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-1P43699 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 LINC01465-201ENST00000408887 1940 ntBASIC16.21■□□□□ 0.19
NKX2-1P43699 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-1P43699 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NKX2-1P43699 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-1P43699 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 AL032819.2-201ENST00000624543 2162 ntBASIC16.2■□□□□ 0.18
NKX2-1P43699 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-1P43699 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-1P43699 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NKX2-1P43699 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.2■□□□□ 0.18
NKX2-1P43699 AC099791.1-201ENST00000416440 715 ntBASIC16.2■□□□□ 0.18
NKX2-1P43699 AC024257.2-201ENST00000549699 147 ntBASIC16.2■□□□□ 0.18
NKX2-1P43699 AC138907.5-202ENST00000569484 235 ntBASIC16.2■□□□□ 0.18
NKX2-1P43699 FAM21FP-204ENST00000608637 956 ntBASIC16.2■□□□□ 0.18
NKX2-1P43699 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 KRT87P-202ENST00000534226 1464 ntBASIC16.2■□□□□ 0.18
NKX2-1P43699 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-1P43699 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX2-1P43699 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-1P43699 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms