Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ATP6V0CP27449 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP6V0CP27449 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 AC116050.2-201ENST00000612102 1779 ntBASIC15.87■□□□□ 0.13
ATP6V0CP27449 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 AC009113.1-201ENST00000570267 2443 ntBASIC15.87■□□□□ 0.13
ATP6V0CP27449 KRT8P36-201ENST00000489121 1440 ntBASIC15.87■□□□□ 0.13
ATP6V0CP27449 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP6V0CP27449 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP6V0CP27449 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.86■□□□□ 0.13
ATP6V0CP27449 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
ATP6V0CP27449 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP6V0CP27449 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 AC009237.14-201ENST00000609975 1594 ntBASIC15.85■□□□□ 0.13
ATP6V0CP27449 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 KRT16P3-201ENST00000439127 1283 ntBASIC15.85■□□□□ 0.13
ATP6V0CP27449 AC245052.3-201ENST00000450182 901 ntBASIC15.85■□□□□ 0.13
ATP6V0CP27449 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATP6V0CP27449 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATP6V0CP27449 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 DUX4L19-201ENST00000557448 1267 ntBASIC15.84■□□□□ 0.13
ATP6V0CP27449 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATP6V0CP27449 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ATP6V0CP27449 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms