Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
KCNA3P22001 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.49■■□□□ 1.51
KCNA3P22001 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 AC011298.2-201ENST00000617989 482 ntBASIC24.49■■□□□ 1.51
KCNA3P22001 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.49■■□□□ 1.51
KCNA3P22001 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.49■■□□□ 1.51
KCNA3P22001 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
KCNA3P22001 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.48■■□□□ 1.51
KCNA3P22001 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.48■■□□□ 1.51
KCNA3P22001 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.48■■□□□ 1.51
KCNA3P22001 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.48■■□□□ 1.51
KCNA3P22001 AL671277.2-201ENST00000458060 996 ntBASIC24.48■■□□□ 1.51
KCNA3P22001 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.48■■□□□ 1.51
KCNA3P22001 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.48■■□□□ 1.51
KCNA3P22001 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.48■■□□□ 1.51
KCNA3P22001 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KCNA3P22001 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
KCNA3P22001 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
KCNA3P22001 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.47■■□□□ 1.51
KCNA3P22001 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
KCNA3P22001 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
KCNA3P22001 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
KCNA3P22001 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
KCNA3P22001 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.47■■□□□ 1.51
KCNA3P22001 HOMER2P1-201ENST00000455653 964 ntBASIC24.47■■□□□ 1.51
KCNA3P22001 AL441883.1-201ENST00000566170 1045 ntBASIC24.47■■□□□ 1.51
KCNA3P22001 AC012313.10-201ENST00000623509 926 ntBASIC24.47■■□□□ 1.51
KCNA3P22001 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
KCNA3P22001 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
KCNA3P22001 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.47■■□□□ 1.51
KCNA3P22001 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
KCNA3P22001 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
KCNA3P22001 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 KRT8P17-201ENST00000453110 1448 ntBASIC24.46■■□□□ 1.51
KCNA3P22001 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.46■■□□□ 1.51
KCNA3P22001 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.46■■□□□ 1.51
KCNA3P22001 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.46■■□□□ 1.51
KCNA3P22001 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
KCNA3P22001 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.46■■□□□ 1.51
KCNA3P22001 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.46■■□□□ 1.51
KCNA3P22001 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KCNA3P22001 TFP1-202ENST00000475455 1573 ntBASIC24.46■■□□□ 1.51
KCNA3P22001 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
KCNA3P22001 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
KCNA3P22001 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.51
KCNA3P22001 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
KCNA3P22001 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
KCNA3P22001 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.45■■□□□ 1.51
KCNA3P22001 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KCNA3P22001 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNA3P22001 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
KCNA3P22001 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.45■■□□□ 1.5
KCNA3P22001 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.45■■□□□ 1.5
KCNA3P22001 KRT18P38-201ENST00000449496 1282 ntBASIC24.45■■□□□ 1.5
KCNA3P22001 AL359075.1-203ENST00000462729 1002 ntBASIC24.45■■□□□ 1.5
KCNA3P22001 PRSS44-201ENST00000515154 1146 ntBASIC24.45■■□□□ 1.5
KCNA3P22001 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.45■■□□□ 1.5
KCNA3P22001 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.45■■□□□ 1.5
KCNA3P22001 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.45■■□□□ 1.5
KCNA3P22001 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.45■■□□□ 1.5
KCNA3P22001 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.45■■□□□ 1.5
KCNA3P22001 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.45■■□□□ 1.5
KCNA3P22001 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNA3P22001 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.45■■□□□ 1.5
KCNA3P22001 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.45■■□□□ 1.5
KCNA3P22001 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNA3P22001 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.45■■□□□ 1.5
KCNA3P22001 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.44■■□□□ 1.5
KCNA3P22001 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.44■■□□□ 1.5
KCNA3P22001 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 AC004951.3-201ENST00000418645 1148 ntBASIC24.44■■□□□ 1.5
KCNA3P22001 YBX1P10-201ENST00000444752 975 ntBASIC24.44■■□□□ 1.5
KCNA3P22001 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNA3P22001 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms