Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
COL11A2P13942 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
COL11A2P13942 AC005229.4-201ENST00000610085 2198 ntBASIC24.46■■□□□ 1.51
COL11A2P13942 KRT18P56-201ENST00000507275 550 ntBASIC24.46■■□□□ 1.51
COL11A2P13942 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.46■■□□□ 1.51
COL11A2P13942 AC139887.4-201ENST00000607877 719 ntBASIC24.46■■□□□ 1.51
COL11A2P13942 AC018553.1-201ENST00000616682 1458 ntBASIC24.46■■□□□ 1.51
COL11A2P13942 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL11A2P13942 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL11A2P13942 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.45■■□□□ 1.51
COL11A2P13942 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL11A2P13942 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.45■■□□□ 1.51
COL11A2P13942 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
COL11A2P13942 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL11A2P13942 AC007663.1-201ENST00000438948 1240 ntBASIC24.45■■□□□ 1.5
COL11A2P13942 AC011298.2-201ENST00000617989 482 ntBASIC24.45■■□□□ 1.5
COL11A2P13942 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.45■■□□□ 1.5
COL11A2P13942 HLA-A-209ENST00000638375 975 ntBASIC24.45■■□□□ 1.5
COL11A2P13942 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL11A2P13942 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.45■■□□□ 1.5
COL11A2P13942 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.44■■□□□ 1.5
COL11A2P13942 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.44■■□□□ 1.5
COL11A2P13942 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COL11A2P13942 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.44■■□□□ 1.5
COL11A2P13942 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
COL11A2P13942 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
COL11A2P13942 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.44■■□□□ 1.5
COL11A2P13942 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.44■■□□□ 1.5
COL11A2P13942 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.44■■□□□ 1.5
COL11A2P13942 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.44■■□□□ 1.5
COL11A2P13942 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.44■■□□□ 1.5
COL11A2P13942 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.44■■□□□ 1.5
COL11A2P13942 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL11A2P13942 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL11A2P13942 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL11A2P13942 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL11A2P13942 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
COL11A2P13942 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL11A2P13942 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL11A2P13942 AC131212.4-201ENST00000623606 975 ntBASIC24.43■■□□□ 1.5
COL11A2P13942 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
COL11A2P13942 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.43■■□□□ 1.5
COL11A2P13942 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.43■■□□□ 1.5
COL11A2P13942 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.43■■□□□ 1.5
COL11A2P13942 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.42■■□□□ 1.5
COL11A2P13942 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.42■■□□□ 1.5
COL11A2P13942 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
COL11A2P13942 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
COL11A2P13942 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.42■■□□□ 1.5
COL11A2P13942 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.42■■□□□ 1.5
COL11A2P13942 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL11A2P13942 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.41■■□□□ 1.5
COL11A2P13942 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
COL11A2P13942 KRT18P48-201ENST00000434763 852 ntBASIC24.41■■□□□ 1.5
COL11A2P13942 TUBB8P6-201ENST00000436895 1288 ntBASIC24.41■■□□□ 1.5
COL11A2P13942 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.41■■□□□ 1.5
COL11A2P13942 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.41■■□□□ 1.5
COL11A2P13942 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 DPP3P2-201ENST00000416030 1696 ntBASIC24.41■■□□□ 1.5
COL11A2P13942 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.41■■□□□ 1.5
COL11A2P13942 FAM207BP-201ENST00000447172 505 ntBASIC24.41■■□□□ 1.5
COL11A2P13942 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.41■■□□□ 1.5
COL11A2P13942 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
COL11A2P13942 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.41■■□□□ 1.5
COL11A2P13942 AP000692.2-201ENST00000608391 879 ntBASIC24.41■■□□□ 1.5
COL11A2P13942 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.41■■□□□ 1.5
COL11A2P13942 AC116407.4-201ENST00000623319 1061 ntBASIC24.41■■□□□ 1.5
COL11A2P13942 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.41■■□□□ 1.5
COL11A2P13942 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL11A2P13942 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms