Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.35■□□□□ 0.37
LCATP04180 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCATP04180 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LCATP04180 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LCATP04180 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.34■□□□□ 0.37
LCATP04180 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.34■□□□□ 0.37
LCATP04180 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LCATP04180 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.34■□□□□ 0.37
LCATP04180 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.34■□□□□ 0.37
LCATP04180 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.34■□□□□ 0.37
LCATP04180 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.34■□□□□ 0.37
LCATP04180 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCATP04180 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
LCATP04180 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.33■□□□□ 0.37
LCATP04180 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.33■□□□□ 0.37
LCATP04180 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LCATP04180 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCATP04180 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LCATP04180 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCATP04180 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LCATP04180 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCATP04180 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LCATP04180 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.33■□□□□ 0.36
LCATP04180 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 GPX1P1-201ENST00000388829 606 ntBASIC17.33■□□□□ 0.36
LCATP04180 MIPEPP3-201ENST00000412105 444 ntBASIC17.33■□□□□ 0.36
LCATP04180 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.33■□□□□ 0.36
LCATP04180 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LCATP04180 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.33■□□□□ 0.36
LCATP04180 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
LCATP04180 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LCATP04180 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.33■□□□□ 0.36
LCATP04180 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.33■□□□□ 0.36
LCATP04180 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCATP04180 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LCATP04180 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LCATP04180 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LCATP04180 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCATP04180 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCATP04180 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.32■□□□□ 0.36
LCATP04180 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
LCATP04180 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LCATP04180 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LCATP04180 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.32■□□□□ 0.36
LCATP04180 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LCATP04180 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.32■□□□□ 0.36
LCATP04180 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LCATP04180 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LCATP04180 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LCATP04180 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LCATP04180 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
LCATP04180 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LCATP04180 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.31■□□□□ 0.36
LCATP04180 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.31■□□□□ 0.36
LCATP04180 NCF1B-203ENST00000435988 1254 ntBASIC17.31■□□□□ 0.36
LCATP04180 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.31■□□□□ 0.36
LCATP04180 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.31■□□□□ 0.36
LCATP04180 AC023632.3-201ENST00000521633 145 ntBASIC17.31■□□□□ 0.36
LCATP04180 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.31■□□□□ 0.36
LCATP04180 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.31■□□□□ 0.36
LCATP04180 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.31■□□□□ 0.36
LCATP04180 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms