Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.52■□□□□ 0.55
OPN1SWP03999 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
OPN1SWP03999 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
OPN1SWP03999 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.51■□□□□ 0.55
OPN1SWP03999 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
OPN1SWP03999 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
OPN1SWP03999 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.51■□□□□ 0.55
OPN1SWP03999 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.51■□□□□ 0.55
OPN1SWP03999 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.51■□□□□ 0.55
OPN1SWP03999 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
OPN1SWP03999 MFSD11-216ENST00000590393 1141 ntBASIC18.51■□□□□ 0.55
OPN1SWP03999 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 AC087623.3-201ENST00000607047 1098 ntBASIC18.51■□□□□ 0.55
OPN1SWP03999 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.51■□□□□ 0.55
OPN1SWP03999 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.51■□□□□ 0.55
OPN1SWP03999 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.51■□□□□ 0.55
OPN1SWP03999 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
OPN1SWP03999 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPN1SWP03999 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
OPN1SWP03999 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPN1SWP03999 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
OPN1SWP03999 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
OPN1SWP03999 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPN1SWP03999 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.5■□□□□ 0.55
OPN1SWP03999 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.5■□□□□ 0.55
OPN1SWP03999 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.5■□□□□ 0.55
OPN1SWP03999 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.5■□□□□ 0.55
OPN1SWP03999 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPN1SWP03999 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.5■□□□□ 0.55
OPN1SWP03999 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.5■□□□□ 0.55
OPN1SWP03999 AL162412.1-201ENST00000567129 965 ntBASIC18.5■□□□□ 0.55
OPN1SWP03999 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.5■□□□□ 0.55
OPN1SWP03999 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
OPN1SWP03999 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
OPN1SWP03999 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.5■□□□□ 0.55
OPN1SWP03999 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.5■□□□□ 0.55
OPN1SWP03999 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.5■□□□□ 0.55
OPN1SWP03999 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.5■□□□□ 0.55
OPN1SWP03999 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
OPN1SWP03999 KRT8P17-201ENST00000453110 1448 ntBASIC18.49■□□□□ 0.55
OPN1SWP03999 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
OPN1SWP03999 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
OPN1SWP03999 RARRES2P4-201ENST00000514074 484 ntBASIC18.49■□□□□ 0.55
OPN1SWP03999 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.49■□□□□ 0.55
OPN1SWP03999 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
OPN1SWP03999 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.49■□□□□ 0.55
OPN1SWP03999 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.49■□□□□ 0.55
OPN1SWP03999 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
OPN1SWP03999 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
OPN1SWP03999 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 BX323043.1-201ENST00000641006 1765 ntBASIC18.48■□□□□ 0.55
OPN1SWP03999 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 MCRIP2P1-201ENST00000394346 511 ntBASIC18.48■□□□□ 0.55
OPN1SWP03999 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 KRT18P11-201ENST00000435214 1283 ntBASIC18.48■□□□□ 0.55
OPN1SWP03999 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.48■□□□□ 0.55
OPN1SWP03999 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
OPN1SWP03999 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.48■□□□□ 0.55
OPN1SWP03999 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
OPN1SWP03999 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.48■□□□□ 0.55
OPN1SWP03999 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.48■□□□□ 0.55
OPN1SWP03999 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
OPN1SWP03999 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.48■□□□□ 0.55
OPN1SWP03999 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
OPN1SWP03999 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
OPN1SWP03999 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
OPN1SWP03999 AC009237.14-201ENST00000609975 1594 ntBASIC18.47■□□□□ 0.55
OPN1SWP03999 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
OPN1SWP03999 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms