Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IFNA1P01562 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.71■□□□□ 0.11
IFNA1P01562 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
IFNA1P01562 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 ATP5G2P3-201ENST00000429083 425 ntBASIC15.71■□□□□ 0.11
IFNA1P01562 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.71■□□□□ 0.11
IFNA1P01562 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.71■□□□□ 0.11
IFNA1P01562 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.71■□□□□ 0.11
IFNA1P01562 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.71■□□□□ 0.11
IFNA1P01562 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.71■□□□□ 0.11
IFNA1P01562 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.71■□□□□ 0.11
IFNA1P01562 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFNA1P01562 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.71■□□□□ 0.11
IFNA1P01562 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IFNA1P01562 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IFNA1P01562 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
IFNA1P01562 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
IFNA1P01562 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
IFNA1P01562 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 AL049812.1-201ENST00000432563 2267 ntBASIC15.7■□□□□ 0.1
IFNA1P01562 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.7■□□□□ 0.1
IFNA1P01562 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
IFNA1P01562 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IFNA1P01562 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
IFNA1P01562 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
IFNA1P01562 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
IFNA1P01562 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
IFNA1P01562 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.7■□□□□ 0.1
IFNA1P01562 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
IFNA1P01562 AC010525.1-201ENST00000585559 441 ntBASIC15.7■□□□□ 0.1
IFNA1P01562 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IFNA1P01562 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
IFNA1P01562 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNA1P01562 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IFNA1P01562 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IFNA1P01562 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNA1P01562 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNA1P01562 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IFNA1P01562 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 AP005435.1-201ENST00000529293 1178 ntBASIC15.69■□□□□ 0.1
IFNA1P01562 MIR3181-201ENST00000578512 73 ntBASIC15.69■□□□□ 0.1
IFNA1P01562 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.69■□□□□ 0.1
IFNA1P01562 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IFNA1P01562 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 AP004607.4-201ENST00000530158 1459 ntBASIC15.69■□□□□ 0.1
IFNA1P01562 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNA1P01562 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IFNA1P01562 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IFNA1P01562 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
IFNA1P01562 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.68■□□□□ 0.1
IFNA1P01562 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.68■□□□□ 0.1
IFNA1P01562 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFNA1P01562 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms