Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.98■□□□□ 0.95
ZBED1O96006 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZBED1O96006 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.98■□□□□ 0.95
ZBED1O96006 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZBED1O96006 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZBED1O96006 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZBED1O96006 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.98■□□□□ 0.95
ZBED1O96006 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZBED1O96006 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.97■□□□□ 0.95
ZBED1O96006 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ZBED1O96006 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 KRT18P29-201ENST00000397031 1267 ntBASIC20.97■□□□□ 0.95
ZBED1O96006 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.97■□□□□ 0.95
ZBED1O96006 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.97■□□□□ 0.95
ZBED1O96006 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.97■□□□□ 0.95
ZBED1O96006 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.97■□□□□ 0.95
ZBED1O96006 AC073648.6-201ENST00000641589 218 ntBASIC20.97■□□□□ 0.95
ZBED1O96006 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ZBED1O96006 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ZBED1O96006 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.97■□□□□ 0.95
ZBED1O96006 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZBED1O96006 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.96■□□□□ 0.95
ZBED1O96006 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 AC128676.1-201ENST00000454392 318 ntBASIC20.96■□□□□ 0.95
ZBED1O96006 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.96■□□□□ 0.95
ZBED1O96006 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZBED1O96006 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.95■□□□□ 0.94
ZBED1O96006 AL162377.1-201ENST00000618844 1793 ntBASIC20.95■□□□□ 0.94
ZBED1O96006 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.95■□□□□ 0.94
ZBED1O96006 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZBED1O96006 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.95■□□□□ 0.94
ZBED1O96006 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 RPS2P52-201ENST00000469610 820 ntBASIC20.95■□□□□ 0.94
ZBED1O96006 TMEM191A-211ENST00000637163 1067 ntBASIC20.95■□□□□ 0.94
ZBED1O96006 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.95■□□□□ 0.94
ZBED1O96006 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 KRT16P6-202ENST00000425692 1426 ntBASIC20.95■□□□□ 0.94
ZBED1O96006 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZBED1O96006 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
ZBED1O96006 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.94■□□□□ 0.94
ZBED1O96006 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.94■□□□□ 0.94
ZBED1O96006 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZBED1O96006 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.94■□□□□ 0.94
ZBED1O96006 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.94■□□□□ 0.94
ZBED1O96006 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.93■□□□□ 0.94
ZBED1O96006 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.93■□□□□ 0.94
ZBED1O96006 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZBED1O96006 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ZBED1O96006 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZBED1O96006 AC233263.1-201ENST00000578059 224 ntBASIC20.93■□□□□ 0.94
ZBED1O96006 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ZBED1O96006 AC069544.1-201ENST00000609399 999 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms