Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NKX2-2O95096 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 AC018553.1-201ENST00000616682 1458 ntBASIC18.34■□□□□ 0.53
NKX2-2O95096 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX2-2O95096 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.34■□□□□ 0.53
NKX2-2O95096 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
NKX2-2O95096 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX2-2O95096 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NKX2-2O95096 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX2-2O95096 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NKX2-2O95096 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NKX2-2O95096 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NKX2-2O95096 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NKX2-2O95096 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.33■□□□□ 0.53
NKX2-2O95096 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NKX2-2O95096 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NKX2-2O95096 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NKX2-2O95096 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NKX2-2O95096 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.33■□□□□ 0.52
NKX2-2O95096 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.33■□□□□ 0.52
NKX2-2O95096 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.33■□□□□ 0.52
NKX2-2O95096 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.33■□□□□ 0.52
NKX2-2O95096 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
NKX2-2O95096 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NKX2-2O95096 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.33■□□□□ 0.52
NKX2-2O95096 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.52
NKX2-2O95096 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.33■□□□□ 0.52
NKX2-2O95096 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NKX2-2O95096 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NKX2-2O95096 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.32■□□□□ 0.52
NKX2-2O95096 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 RPS2P52-201ENST00000469610 820 ntBASIC18.32■□□□□ 0.52
NKX2-2O95096 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.32■□□□□ 0.52
NKX2-2O95096 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.32■□□□□ 0.52
NKX2-2O95096 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.32■□□□□ 0.52
NKX2-2O95096 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.32■□□□□ 0.52
NKX2-2O95096 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.32■□□□□ 0.52
NKX2-2O95096 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
NKX2-2O95096 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NKX2-2O95096 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX2-2O95096 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.31■□□□□ 0.52
NKX2-2O95096 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms