Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DUX4L26-201ENST00000489078 1255 ntBASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 AP005242.2-201ENST00000580065 1175 ntBASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC187A0A096LP49 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 FBXW4P1-201ENST00000426721 2239 ntBASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 ATP5G1P1-201ENST00000448724 379 ntBASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC187A0A096LP49 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC187A0A096LP49 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC187A0A096LP49 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC187A0A096LP49 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC187A0A096LP49 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC187A0A096LP49 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC187A0A096LP49 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 MESTP1-201ENST00000404287 994 ntBASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 YBX1P10-201ENST00000444752 975 ntBASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 EGLN1P1-201ENST00000531623 762 ntBASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 NTF6B-201ENST00000591913 560 ntBASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC187A0A096LP49 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 AC104076.2-201ENST00000448912 469 ntBASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms