Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV18A0A075B6X5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 AC010141.2-201ENST00000452426 721 ntBASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 SLC7A5P2-201ENST00000553010 536 ntBASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 FAM21FP-204ENST00000608637 956 ntBASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV18A0A075B6X5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 AC007322.3-201ENST00000426526 701 ntBASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 AL032819.2-201ENST00000624543 2162 ntBASIC17.04■□□□□ 0.32
TRAV18A0A075B6X5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 AL355001.2-201ENST00000620617 1191 ntBASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRAV18A0A075B6X5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms